Gene detail

Detailed information of ENSTGOP00000007123.1 in Osedax fenrisi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSTGOP00000007123.1	LARGE PROLINE-RICH PROTEIN BAG6	chr2	17602824	17610920	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSTGOT00000008174.1

ATGATTAACTTATCAGTTAAGTCTCTAGACGGCATTACTAAAGCTTACACTGTCGATGAAGAGATTACTGTTAAGCAGTTTAAAGAAATTATTGCAACGGATATAAACATTGAAGTTGGTAAACAAAAATTAATTTATCGAGGCAGAGTACTTACCAATGATAAGAAACTTGAAGAATATAATTTAGACGATAAGGTTTTACACGTTGTATCACAAGTATCAAGGCCTAGATCTAATGCGACACCCGACACTGGTTCCAGTAACCAAACTGGGGCTCAAATGGGGCAAGCTAGAAGATCTGAAGCTGCTAGTAGTGTAGACTTGCACATCAACGTAGCACCGATACATATATCTATGATGGATACACCGAACATATCCAGGAGAAATCATATAATACAACTTCTGCATGGAGCCCAGCAAGCACTCAACAACTTGAATCAGTTTAAGTCCCCTACTGCTACTACATCTTCATCATCTTCATCAACTACTACTACTACTACTACTACTGCTGCTACTGCTGCTGGAGTAACGAGTGGAGTAACGAGTGGAGTAACGAGTGGAGCAGCTGGTAGTTCAGCTGGTAGTTCAGCGGGTAGTTCAGCTGGTGAAGAGCCAGTACCACAACAACGGGAACAAGACAACGAAGACGTCAACAACAACAACCGTATGACCTCTGTACAGTTGGCCGAGCTACTCAGACGATGGTCGTATATATCTCAACAACTTCAACCCTACGTGGTCAGATACACTGCCTTGCTGGCTGAACATAACACAGAATCATCATCTTCTATCTCAGCCCGACAACACGAAGATCATCATATCAACGAAGCCATGCATCTGTTGGCCCACGCTCAACACATCATGACTGACTTCACCGTGAATCTGTCTGATCCGTTGCCTCGTATGGCTATTGTTCCTGCCACTCAGTCGCACAATACGGCCAATAGACTGCCTTCTTTCATTCGCAACCTCCGCAGAGAAGCCACACAAAACACCGAAGCAGATCCAACCTCTAATCTAGTAAGGAATCTTTTGAGCCACATTACTGACTTACCTAGAACTAATGAAAATACTACTCAAGCTAATGGAAGGTTCATAAGACAGCATGTATTTGTTATTGGAGCGGATGGAAGGGCACAGGAAGTGGTCAGCACTAGAGCTAATGGCATGCCGAGTCCAGCCCCTAGCGCCGGGGTAATGACCTCTAATTCAGGTGCTACGACCTCTAGTGCAAGTGCTACTGCCTCTAGTGCAAGTTCTACGACCTCTAGTGCAGGTGTTACGACCTCTACGAACTCCGCCAGTCAACCACGAACAACAGCAACCAGATCCAACATAAGACCTAGACAAACTGCCAGAATCTCTGTAACTGGTCCTCCCGCCTATCATAATCACCACTATGCCCCCTTCTCCAGGCACCCCCCGCACCACCATCACCACCCCCCTAACAATCAGAACATTCAAAGGGTGACTAGGAACAGTGCCGTCTCTCGCGCTATGGCCCGAGCCAACACTCCTGTCGGTTTCTCTGAAGTGATTGCCAACATACGCCGCATCAACGAAACCATGTGGTCTCAGAACAATGTAGACCATAACACTACCTCTAGTGCTGTTGGTGACACTAGTGCTGCAGCCCCCCCCACTACTGCGGATGCCTCCACTGCTACCCCCGGTGCTAATCAGGGTTCTGCCAGGAATGTCATAACCTCCTCCGCCATGGCAGCTAGGATCCTTCAGCAAGAGTTCTTTCAGTTACACGAAAACACTCCCAACCAATCAAACACTGACAATAATAACACCTCTGTTCCGGAGAGAGCTGGCGATGAGGATATTTCATTGATTTCTGTGGAAATGCCTAATACTGGGGATAACAATCTACTAGATCCTGTTTACAATGAGAACAGCACGACGCCTCCTCAGCCTACTGTATACAGAGTGTATGACCCCTATCTTCGCTGCAATTCTCACTTCTTCCTTCAGTGCGACCCTCAATCCAGGAGACCTAGAGTTTCCAATGGGGCGGCACGTGTAACCCCGCTACCCACCTCTACCTCGACCTCCACTTCAACCACCTCAACCACCACTACCACTGCTAGAGAAACCCGTAGTCCGAATCCTTTCCTTATTACCAGAAGCTCTAATAACATGTCAAATGGTCAGCCGAATCCAATACAAATCCACCGTAATATGATACTAAGAGATCAACGCCCTTCTACTAGTAGAACTCCACGTGTTAACATTATTCATAGGGCGACTAAACCTACCCTCAAGGATAAAAAGCGGTTCAAAGATTATATCATAGAAATCAGTAAATACCTTTCTAGAGATTCATCAAATGATTCTGAAGATGATATCAAAATTGAAACTATTTCTTTTGTGAAAGCACTGAAATCCTACATAAGTTCAACATACAACATAGACTTATGTGGGGATGATGATGTGAAAGAGGCTTGCGATCGTATCTTTGAGAATATAGATCCAGACTTCTATAAAATTTGTAATGAAAAGAAAGCTAAACATGGCCTGAATTTATCACGTTCAATTTTAAACTTTTTCAAAGAAGCTCTACCAAAATTATTCTCCTTGATTATCGACCCGAGTAAACAAACTGATGAATTCCATTTGTTCTTTATTGATGCGATCAAAGATTTCATATATTCTGTGTCAGCTATCAATCAACATTGTATGCATATCAACTTGTCCCCAGAACCTATGATTGATCTTATGAATAAACAAATGAGGAGTCTGTTCAAGAAACATAAAAATTTTTTCATAATGGGCAAAATCACTCAAATGTTGGAGATGTTCGTGGATCTAAAATATACAATGGCTACAGGAGATATTTCTAAATACATCGAGGTCGGTGAAGATAACCAGGAAGTACAGATGGATGAGTCATCACAATCTTCATCGAAACAGTCGCCCGTAGACAAGCCACAACCGAAGCGACCTGACATTGCTGCCGATGTGGGAGAGTTTCCAGACCTTCCGGAAGTTCTTAGTGCTGGAATCACGATGGAAGAGAGTAGCGATTCCTCTTGGAGGAAAAAAGTTCTACCAGTTTGTATTCAAGCCAAGGACATGACAAGTGGTCTCAGTAATAGAGTGGATGAGCCGTTGAGCGGAAGCTATGCCGGTACCGATATCCCGGAACCTAAACGAAGAAAGACGTCAAATGGTGATGATTAA

Transcript

ENSTGOT00000008174

cctTTAAATATAGTTGAGTTTTGTTTgggtttatatttgaataatatcttgcaattttaataatataatatttctgatAAGgtgatatttacaaatttttttttactattaattattttattgaatattatatttctagagatctaatattgatataaacataataaatattaattaattagaatcGTTCGAAATGATTAACTTATCAGTTAAGTCTCTAGACGGCATTACTAAAGCTTACACTGTCGATGAAGAGATTACTGTTAAGCAGTTTAAAGAAATTATTGCAACGGATATAAACATTGAAGTtggtaaacaaaaattaatttatcgaGGCAGAGTACTTACCAATGATAAGAAACTTGAAGAATATAATTTAGACGATAAGGTTTTACACGTTGTATCACAAGTATCAAGGCCTAGATCTAATGCGACACCCGACACTGGTTCCAGTAACCAAACTGGGGCTCAAATGGGGCAAGCTAGAAGATCTGAAGCTGCTAGTAGTGTAGACTTGCACATCAACGTAGCACCGATACATATATCTATGATGGATACACCGAACATATCCAGGAGAAATCATATAATACAACTTCTGCATGGAGCCCAGCAAGCACTCAACAACTTGAATCAGTTTAAGTCCCCTACTGCTACTACatcttcatcatcttcatcaactactactactactactactactgctgctactgctgctggaGTAACGAGTGGAGTAACGAGTGGAGTAACGAGTGGAGCAGCTGGTAGTTCAGCTGGTAGTTCAGCGGGTAGTTCAGCTGGTGAAGAGCCAGTACCACAACAACGGGAACAAGACAACGAAGACGTCAACAACAACAACCGTATGACCTCTGTACAGTTGGCCGAGCTACTCAGACGATGGTCGTATATATCTCAACAACTTCAACCCTACGTGGTCAGATACACTGCCTTGCTGGCTGAACATAACACAGAATCATCATCTTCTATCTCAGCCCGACAACACGAAGATCATCATATCAACGAAGCCATGCATCTGTTGGCCCACGCTCAACACATCATGACTGACTTCACCGTGAATCTGTCTGATCCGTTGCCTCGTATGGCTATTGTTCCTGCCACTCAGTCGCACAATACGGCCAATAGACTGCCTTCTTTCATTCGCAACCTCCGCAGAGAAGCCACACAAAACACCGAAGCAGATCCAACCTCTAATCTAGTAAGGAATCTTTTGAGCCACATTACTGACTTACCTAGAACTAATGAAAATACTACTCAAGCTAATGGAAGGTTCATAAGACAGCATgTATTTGTTATTGGAGCGGATGGAAGGGCACAGGAAGTGGTCAGCACTAGAGCTAATGGCATGCCGAGTCCAGCCCCTAGCGCCGGGGTAATGACCTCTAATTCAGGTGCTACGACCTCTAGTGCAAGTGCTACTGCCTCTAGTGCAAGTTCTACGACCTCTAGTGCAGGTGTTACGACCTCTACGAACTCCGCCAGTCAACCACGAACAACAGCAACCAGATCCAACATAAGACCTAGACAAACTGCCAGAATCTCTGTAACTGGTCCTCCCGCCTATCATAATCACCACTATGCCCCCTTCTCCAGGCACCCCCcgcaccaccatcaccaccccCCTAACAATCAGAACATTCAAAGGGTGACTAGGAACAGTGCCGTCTCTCGCGCTATGGCCCGAGCCAACACTCCTGTCGGTTTCTCTGAAGTGATTGCCAACATACGCCGCATCAACGAAACCATGTGGTCTCAGAACAATGTAGACCATAACACTACCTCTAGTGCTGTTGGTGACACTAGTGCTGCAGCCCCCCCCACTACTGCGGATGCCTCCACTGCTACCCCCGGTGCTAATCAGGGTTCTGCCAGGAATGTCATAACCTCCTCCGCCATGGCAGCTAGGATCCTTCAGCAAGAGTTCTTTCAGTTACACGAAAACACTCCCAACCAATCAAACACTGACAATAATAACACCTCTGTTCCGGAGAGAGCTGGCGATGAGGATATTTCATTGATTTCTGTGGAAATGCCTAATACTGGGGATAACAATCTACTAGATCCTGTTTACAATGAGAACAGCACGACGCCTCCTCAGCCTACTGTATACAGAGTGTATGACCCCTATCTTCGCTGCAATTCTCACTTCTTCCTTCAGTGCGACCCTCAATCCAGGAGACCTAGAGTTTCCAATGGGGCGGCACGTGTAACCCCGCTACCCACCTCTACCTCGACCTCCACTTCAACCACCtcaaccaccactaccactgctaGAGAAACCCGTAGTCCGAATCCTTTCCTTATTACCAGAAGCTCTAATAACATGTCAAATGGTCAGCCGAATCCAATACAAATCCACCGTAATATGATACTAAGAGATCAACGCCCTTCTACTAGTAGAACTCCACGTGTTAACATTATTCATAGGGCGACTAAACCTACCCTCAAGGATAAAAAGCGGTTCAAAGATTATATCATAGAAATCAGTAAATACCTTTCTAGAGATTCATCAAATGATTCTGAAGATGATATCAAAATTGAAACTATTTCTTTTgtgAAAGCACTGAAATCCTACATAAGTTCAACATACAACATAGACTTATGTGGGGATGATGATGTGAAAGAGGCTTGCGATCGTATCTTTGAGAATATAGATCCAGACTTCTATAAAATTTGTAATGAAAAGAAAGCTAAACATGGCCTGAATTTATCACGTTCAATTTTAAACTTTTTCAAAGAAGCTCTACCAAAATTATTCTCCTTGATTATCGACCCGAGTAAACAAACTGATGAATTCCATTTGTTCTTTATTGATGCGATCAAAGATTTCATATATTCTGTGTCAGCTATCAATCAACATTGTATGCATATCAACTTGTCCCCAGAACCTATGATTGATCTTATGAATAAACAAATGaggaGTCTGTTCAAGAAACATAAAAATTTTTTCATAATGGGCAAAATCACTCAAATGTTGGAGATGTTCGTGGATCTAAAATATACAATGGCTACAGGAGATATTTCTAAATACATCGAGGTCGGTGAAGATAACCAGGAAGTACAGATGGATGAGTCATCACAATCTTCATCGAAACAGTCGCCCGTAGACAAGCCACAACCGAAGCGACCTGACATTGCTGCCGATGTGGGAGAGTTTCCAGACCTTCCGGAAGTTCTTAGTGCTGGAATCACGATGGAAGAGAGTAGCGATTCCTCTTGGAGGAAAAAAGTTCTACCAGTTTGTATTCAAGCCAAGGACATGACAAGTGGTCTCAGTAATAGAGTGGATGAGCCGTTGAGCGGAAGCTATGCCGGTACCGATATCCCGGAACCTAAACGAAGAAAGACGTCAAATGgtgatgattaatattattattttcttcaattaaatttattattattatatacaccatataactataaatatcttattttatttgctCTATGATCTACAATAAAATGTTAATGTAAA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan
PF12057	BAG6	BCL2-associated athanogene 6	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR021925	Domain	Large proline-rich protein BAG6	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15204	LARGE PROLINE-RICH PROTEIN BAG6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0031593	Molecular Function	polyubiquitin modification-dependent protein binding	Interproscan
GO:0051787	Molecular Function	misfolded protein binding	Interproscan
GO:0071818	Cellular Component	BAT3 complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-