Gene detail

Detailed information of ENSTGOP00000003821.1 in Osedax fenrisi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSTGOP00000003821.1	ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY	chr8	6971157	6981588	+

Gene Structure

More details in Jbrowse Sequence

CDS

ENSTGOT00000004180.1

ATGAACGAAAATAGCGTCTCTGGTTCCTTGTCTCAGCTACAGTTCAAAAAGAGTCAGCTTCACTCTGAGATCATGAGATGTGAACAGGAGAACAACGACACTCTGCACATCTCAGAGCTGCGAGAGAATATGCGCCAAGTCGACGAAAAACTGAAAATCTGTGATGAGGATACTTGTAGCAAGGATGGCATATCTGGCAAGGAGGATGATGTGAAACTGAAACTTAACTACGGCACCTGGAACCTCAATGAGAATGGTAACCACACCTCGGTTGCAGATGATGCCAGTGTGAACAGTTTCAAATCCACTGACTTGATTTCAAACATTTCACTCACGAAGTCGGACGATGATTCAGATAAACCACTAGCCTCTAAGGTGGAAATGATTTACTCGCTACTGATCATGCTTGGTAAACATGACAAATCTGACATCAGCAAAACCCTACTGACCATGTCCAGATCTCAGGAGAGCTGTAACTCAATGAGACAATCTGGTTGTCTTCCCATTCTGATACAGCTGCTTCACGGAGATGCATCTGAGATAATTTCTACATCATCTTGTACGTCATCCGATAGTGATAGTACTCATACAACTTCTCTATCTCGAGCTGACCCCGAATCTAGGTCAAGGGCATCAGCCGCCCTTCACAATATCGTACACTCTCACCCAGATGACAAAAGAGGTAGGAAGGAAGCTAGATCTCTGAGACTGTTAGAACAGGTGCGGGCGTTCACTAATCTCTCTTTGGACAACAAATTCATAGAAGGAAGTGACCACGATGCAGGCCCAGCTATAGCTGTTCTGATGAGGCTCTCCTTCGATGAGGAACACAGGCATGCTATCTGCACACTAGGTGGCGTGCAAGCTATCGCTGAACTATTGACCCTACAGACGAGCAGTACCTCGATACAGAGGTATGCCTGCATGGCCCTCACTAATCTTACGTTCGGAGATGGTACCAATAAAGCCCTACTCTGCAGTATGAGGTCTCCCCTCAAGTCTATCATCGGGCAATTGTCAGCCGATGACAACGATCTTAGACAGGTAAGTGCTAGTGTATTACGTAACCTATCGTGGAGAGCAGACCTAGCTAGTAAACTATCACTGAGAGAAAACGGCAGCGTACAGGCTTTAATGTTGTCCGCCATGATGCCCGTCGATAAAAGTATAGCCCTTCATACGAGTGAGGCTGCATTGAAGTCAATACTGTCGGCCCTCTGGAATCTCAGCGCCCATTGTCGTATCAATAAGGTCACCATCTGTGAGATCGAAGGTGCGCTACCGTTCCTCATCGACACACTATCACATTCGAGTGCCGCTATAGTGGAGAATGGAGGCGGAGTGTTACGTAATGTATCTAGTGTTATTGCATCATCGCAACACCTACGTCAGATCCTGCGCACCAGAGACACCCTTCACATCCTGTTGGATCAGCTGAGAGCCCCTTCGCTGGTTATCGTCAGCAATGCTTGCGGTTCTCTATGGAACCTGTCAGCCCGATGTGTAATAGACCAGCAGAGACTGTGGACTCTGGGAGCCGTAGCGATGCTGAGGAGACTAGTGGACAGTCGTCATCGTATGATAGCTACCGGTAGCGCCGCTGCTCTCAAGAATCTTTTAGCGGGACGAAGTTCACTGAATCTTGACCCGGATATCACCGACACCGCCACTGCTTCATCGACGGCATCCAGTGATGGTCATGGTTCCTCGAATAGACTCTATGTACGCCGACAACGTGACTCAGTTCTTAATGCGGAGGACATCGCTGAGGACATTGCCCGGCGGAAAGATCTAGAAGAAACCTGCGATAATGTGGACAGCCCTCGACACAGTCCTTCAACAAGTATCGCTAATGCTTTACCCAATTGTACGTATGAAGTGAAGAAACCCTGTAAAGATCCAATAGAGGTACGCAAACTGAATGACCTTCAGAACCAGGCAGCAGACGAATCTATTAACTTCAGTATCCGCTTTGACGAAACCACACCTCATGACCCCCGCGCCCCCTACATACGAGAAACATCCGATGCCTCCACCACATCCGGCTCCTCATCCTCCGCTACCACAGATAATAGAATAGCGGGCAAACGAGGGCCTCCTCCACCTGCAGCGACCAACGTCTATCTGGACCACGGTACAGACGCTATCAACGACGACAGCGACAATTTGAGGACGTACTGCACTGAAGGAACTCCCTTGAATTTCCTATCTACCGCCACCTCTCTAACTGATCTCACACAAACCGAGCACAGCCAACAGGAAACATCACATGACGACGACGTAGAAGACATCATTGAAAAACCTATCAAGTATTCCACAGAAGACACGCCCTTATCGTTCTCGAGGGAATCCTCTCTATCATCGTTGGCGAACACCTCTAGTTTCAGTGCACCTGGAGCTTCTAACGATGCTGCCATCTTTGATATTCATGACAACTCGTCTTCTCTGCGTGTACTGCCCTCAATCGATGAGAATAGCTCCCTCGACATCGGCAACAACCGGAAGTCCTACGTGAAAGTTCCTGCTAAGAGCGTTACTTTCGACGTCGACCAATCCCCGATGATGTTTTCGAGGAGCTCCAGTCTCGGTTCCCTGAGTTCGTTCGATACTCACTCCGTTCACAGTTCAGTGGTAAGCGATTACTCGAGGCGAACGAGTCAGGTGGTATCCCCATCAGAACTACCTGACTCCCCTTCAGACACGATGCCCGGAACCTCTCCTCCTACTCAGAGAGAGTGTCTCCGTGAGCCCGTGCTAAGGGGGCGAACACCCGGTGAAGAATCTGATACAGTAGTCGATGTGGTGGGGGCTGGTGATATGACTCAATGGTCGTATGACACTCAGTCAATAGCAGCCGGTAGTGAACTCAGCGTTCTAACACTAGATGAACCTCGTATACTGAAGGACTCAGACTTGAGAAGAATGCCCCTAGCAGGAGAGGAAGATGAGGATGAAGATGACCTAAATATAACTGGGGTGACGGTAATAGCGGCACCTACAGTGAAACGAAACCTAGTATCCCCTACATCTGATGAGGACCGCCTCCTTCAGGATTGTATCTCTTTAGGAATGCCCCCCCGCAGTGTCAAGCGAAAGTCTCGACACTCGCAGCGAAACTCTCCGGTAGAGGTCATTGAAGATTCTAATGAAGAAGTGTTGTGTTCGTTTGCTACGGAGGACACCCCCTTGACATTCTCAAGGGCAGATTCCGACCTCTCGGATATCTCCTTCGATGACAAACCAGAAACTGACAAACGACATCTAATAAATCATAGGTCAAGTTCAGAAGACCTTTCCGATGATTTATTATCAGCCGCCATTGAAGCAGGTAAACCTCCAGCAAGACCTAAACGTCAGACCCCATCAAAACTACGTACACACGTGGATGTGGTTAGGAGTTCAATGGGTCAATCTCCGAATACCTCACCCGATCATAAGTTCAACAGAAGTCGAGGTCCAAAACTTGGATTCATTTCAAAGCTACGAACCCCAAACAAAGCTCCAGCAACGCCCCCTGTCGGTTACGATACCCCTCCCAGATGTTACGATATCGAAGGTACTCCAAATTATTTCTCAAGCAATTCTTCTCTATCTTCTTTGGCTAGTTCACTTGAAGACCTTGAAGAAGGCATAGAAAGACTAAAGCTAGATGAACCTTGCCCTCCGTCTCCTAAACCTCTCCTATGTATACCGGAGGAAGTTCTCATCACCTCACCCCACCTGTACGCCGTCGAAGACACCCCTGATGGTATCCTGTCTCGCCGTAGTTCTCTCAGCTCATTATCGGTGGACTTGACCGATGATGATGATGATGTCCCAGTAACAGGCGACCTCTCGTTGACCTATACTTCGGTGGCACCCCCTACAGATGACCTTCGCGATGAAACCATGCCTATTATGAGCGTATCACTGATGACGGGGATACAGATACCACCCGGTGGTACCATAGTTCTCGAGTCTTTCTGTACCCAATCAGAGCCCAGCACACGGTGCCACCCTCCTCCTCCCTCCGTCTCAGTCAAGCGTAACGTTAAGACTACACAGATACGTAGCACCACTAGGAACACCACCACTGGTCAAATTCAACGAGTGAAAGCGGTCAGTAAGATTGCTTCTATTTGGAAATCTCCCGGACCAGTCACGAAATCGATCTCAGCCACCTCCACATCACCCATTAGCCGATCTAGAACTCCACTGAACTCCACTAAAGCCCCTGTGAAACAGGGCCTAAGTAAAACTATAGCATCTAAACCGACTACCTATAATAGCACTAATGTAAATAGCAAAACTTTTAAATCTAAACCTATTTCTAAACCTACTATCAGTGGGGTTAAAAGCCCTTCATTGTACAACACTAAAACCACTAATGGTAAAACTGGCGTAAGTATCAAATCAACACTTACCAATAGTAGGATTACATCTAATGTTAAAAATTCTCTTGCCAATAGTAAAACTACACCTACTAATACCAGAGTTACTAGTAAAACCACTCCTGTATTAACAAAGAATAAAATGATTGCTTCGAAAACCCCTCCCTTAAAAACTACCCCTGTTCACAGTAAATATTCGCAATCGAATACTAGGACATCACTAAATGGAAAATCATCACCTGTGATGAGTAAACCAATAACTAAAACTACATTC

Transcript

ENSTGOT00000004180

GAGAGAACTCGGAGATGAAAATGTTTCACAAACTGGAGGGTCAAACGACGACCTTACAAATGTTTCTGAAGGTCGATGTGACCTAGTCGCCATCTCATCGCTTGACAATGAGGAATTCAGTGAAATCAACGACTTCAGTGAAATGAACGAAAATAGCGTCTCTGGTTCCTTGTCTCAGCTACAGTTCAAAAAGAGTCAGCTTCACTCTGAGATCATGAGATGTGAACAGGAGAACAACGACACTCTGCACATCTCAGAGCTGCGAGAGAATATGCGCCAAGTCGACGAAAAACTGAAAATCTGTGATGAGGATACTTGTAGCAAGGATGGCATATCTGGCAAGGAGGATGATGTGAAACTGAAACTTAACTACGGCACCTGGAACCTCAATGAGAATGGTAACCACACCTCGGTTGCAGATGATGCCAGTGTGAACAGTTTCAAATCCACTGACTTGATTTCAAACATTTCACTCACGAAGTCGGACGATGATTCAGATAAACCACTAGCCTCTAAGGTGGAAATGATTTACTCGCTACTGATCATGCTTGGTAAACATGACAAATCTGACATCAGCAAAACCCTACTGACCATGTCCAGATCTCAGGAGAGCTGTAACTCAATGAGACAATCTGGTTGTCTTCCCATTCTGATACAGCTGCTTCACGGAGATGCATCTGAGATAATTTCTACATCATCTTGTACGTCATCCGATAGTGATAGTACTCATACAACTTCTCTATCTCGAGCTGACCCCGAATCTAGGTCAAGGGCATCAGCCGCCCTTCACAATATCGTACACTCTCACCCAGATGACAAAAGAGGTAGGAAGGAAGCTAGATCTCTGAGACTGTTAGAACAGGTGCGGGCGTTCACTAATCTCTCTTTGGACAACAAATTCATAGAAGGAAGTGACCACGATGCAGGCCCAGCTATAGCTGTTCTGATGAGGCTCTCCTTCGATGAGGAACACAGGCATGCTATCTGCACACTAGGTGGCGTGCAAGCTATCGCTGAACTATTGACCCTACAGACGAGCAGTACCTCGATACAGAGGTATGCCTGCATGGCCCTCACTAATCTTACGTTCGGAGATGGTACCAATAAAGCCCTACTCTGCAGTATGAGGTCTCCCCTCAAGTCTATCATCGGGCAATTGTCAGCCGATGACAACGATCTTAGACAGGTAAGTGCTAGTGTATTACGTAACCTATCGTGGAGAGCAGACCTAGCTAGTAAACTATCACTGAGAGAAAACGGCAGCGTACAGGCTTTAATGTTGTCCGCCATGATGCCCGTCGATAAAAGTATAGCCCTTCATACGAGTGAGGCTGCATTGAAGTCAATACTGTCGGCCCTCTGGAATCTCAGCGCCCATTGTCGTATCAATAAGGTCACCATCTGTGAGATCGAAGGTGCGCTACCGTTCCTCATCGACACACTATCACATTCGAGTGCCGCTATAGTGGAGAATGGAGGCGGAGTGTTACGTAATGTATCTAGTGTTATTGCATCATCGCAACACCTACGTCAGATCCTGCGCACCAGAGACACCCTTCACATCCTGTTGGATCAGCTGAGAGCCCCTTCGCTGGTTATCGTCAGCAATGCTTGCGGTTCTCTATGGAACCTGTCAGCCCGATGTGTAATAGACCAGCAGAGACTGTGGACTCTGGGAGCCGTAGCGATGCTGAGGAGACTAGTGGACAGTCGTCATCGTATGATAGCTACCGGTAGCGCCGCTGCTCTCAAGAATCTTTTAGCGGGACGAAGTTCACTGAATCTTGACCCGGATATCACCGACACCGCCACTGCTTCATCGACGGCATCCAGTGATGGTCATGGTTCCTCGAATAGACTCTATGTACGCCGACAACGTGACTCAGTTCTTAATGCGGAGGACATCGCTGAGGACATTGCCCGGCGGAAAGATCTAGAAGAAACCTGCGATAATGTGGACAGCCCTCGACACAGTCCTTCAACAAGTATCGCTAATGCTTTACCCAATTGTACGTATGAAGTGAAGAAACCCTGTAAAGATCCAATAGAGGTACGCAAACTGAATGACCTTCAGAACCAGGCAGCAGACGAATCTATTAACTTCAGTATCCGCTTTGACGAAACCACACCTCATGACCCCCGCGCCCCCTACATACGAGAAACATCCGATGCCTCCACCACATCCGGCTCCTCATCCTCCGCTACCACAGATAATAGAATAGCGGGCAAACGAGGGCCTCCTCCACCTGCAGCGACCAACGTCTATCTGGACCACGGTACAGACGCTATCAACGACGACAGCGACAATTTGAGGACGTACTGCACTGAAGGAACTCCCTTGAATTTCCTATCTACCGCCACCTCTCTAACTGATCTCACACAAACCGAGCACAGCCAACAGGAAACATCACATGACGACGACGTAGAAGACATCATTGAAAAACCTATCAAGTATTCCACAGAAGACACGCCCTTATCGTTCTCGAGGGAATCCTCTCTATCATCGTTGGCGAACACCTCTAGTTTCAGTGCACCTGGAGCTTCTAACGATGCTGCCATCTTTGATATTCATGACAACTCGTCTTCTCTGCGTGTACTGCCCTCAATCGATGAGAATAGCTCCCTCGACATCGGCAACAACCGGAAGTCCTACGTGAAAGTTCCTGCTAAGAGCGTTACTTTCGACGTCGACCAATCCCCGATGATGTTTTCGAGGAGCTCCAGTCTCGGTTCCCTGAGTTCGTTCGATACTCACTCCGTTCACAGTTCAGTGGTAAGCGATTACTCGAGGCGAACGAGTCAGGTGGTATCCCCATCAGAACTACCTGACTCCCCTTCAGACACGATGCCCGGAACCTCTCCTCCTACTCAGAGAGAGTGTCTCCGTGAGCCCGTGCTAAGGGGGCGAACACCCGGTGAAGAATCTGATACAGTAGTCGATGTGGTGGGGGCTGGTGATATGACTCAATGGTCGTATGACACTCAGTCAATAGCAGCCGGTAGTGAACTCAGCGTTCTAACACTAGATGAACCTCGTATACTGAAGGACTCAGACTTGAGAAGAATGCCCCTAGCAGGAGAGGAAGATGAGGATGAAGATGACCTAAATATAACTGGGGTGACGGTAATAGCGGCACCTACAGTGAAACGAAACCTAGTATCCCCTACATCTGATGAGGACCGCCTCCTTCAGGATTGTATCTCTTTAGGAATGCCCCCCCGCAGTGTCAAGCGAAAGTCTCGACACTCGCAGCGAAACTCTCCGGTAGAGGTCATTGAAGaTTCTAATGAAGAAGTGTTGTGTTCGTTTGCTACGGAGGACACCCCCTTGACATTCTCAAGGGCAGATTCCGACCTCTCGGATATCTCCTTCGATGACAAACCAGAAACTGACAAACGACATCTAATAAATCATAGGTCAAGTTCAGAAGACCTTTCCGATGATTTATTATCAGCCGCCATTGAAGCAGGTAAACCTCCAGCAAGACCTAAACGTCAGACCCCATCAAAACTACGTACACACGTGGATGTGGTTAGGAGTTCAATGGGTCAATCTCCGAATACCTCACCCGATCATAAGTTCAACAGAAGTCGAGGTCCAAAACTTGGATTCATTTCAAAGCTACGAACCCCAAACAAAGCTCCAGCAACGCCCCCTGTCGGTTACGATACCCCTCCCAGATGTTACGATATCGAAGGTACTCCAAATTATTTCTCAAGCAATTCTTCTCTATCTTCTTTGGCTAGTTCACTTGAAGACCTTGAAGAAGGCATAGAAAGACTAAAGCTAGATGAACCTTGCCCTCCGTCTCCTAAACCTCTCCTATGTATACCGGAGGAAGTTCTCATCACCTCACCCCACCTGTACGCCGTCGAAGACACCCCTGATGGTATCCTGTCTCGCCGTAGTTCTCTCAGCTCATTATCGGTGGACTTGaccgatgatgatgatgatgtccCAGTAACAGGCGACCTCTCGTTGACCTATACTTCGGTGGCACCCCCTACAGATGACCTTCGCGATGAAACCATGCCTATTATGAGCGTATCACTGATGACGGGGATACAGATACCACCCGGTGGTACCATAGTTCTCGAGTCTTTCTGTACCCAATCAGAGCCCAGCACACGGTGCCACCCTCCTCCTCCCTCCGTCTCAGTCAAGCGTAACGTTAAGACTACACAGATACGTAGCACCACTAGGAACACCACCACTGGTCAAATTCAACGAGTGAAAGCGGTCAGTAAGATTGCTTCTATTTGGAAATCTCCCGGACCAGTCACGAAATCGATCTCAGCCACCTCCACATCACCCATTAGCCGATCTAGAACTCCACTGAACTCCACTAAAGCCCCTGTGAAACAGGGCCTAAGTAAAACTATAGCATCTAAACCGACTACCTATAATAGCACTAATGTAAATAGCAAAACTTTTAAATCTAAACCTATTTCTAAACCTACTATCAGTGGGGTTAAAAGCCCTTCATTGTACAACACTAAAACCACTAATGGTAAAACTGGCGTAAGTATCAAATCAACACTTACCAATAGTAGGATTACATCTAATGTTAAAAATTCTCTTGCCAATAGTAAAACTACACCTACTAATACCAGAGTTACTAGTAAAACCACTCCTGTATTAACAAAGAATAAAATGATTGCTTCGAAAACCCCTCCCTTAAAAACTACCCCTGTTCACAGTAAATATTCGCAATCGAATACTAGGACATCACTAAATGGAAAATCATCACCTGTGATGAGTAAACCAATAACTAAAACTACATTCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05923	APC_r	APC repeat	Motif	Interproscan
PF18797	APC_rep	Adenomatous polyposis coli (APC) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000225	Repeat	Armadillo	Interproscan
IPR009223	Repeat	Adenomatous polyposis coli protein repeat	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR026818	Family	Adenomatous polyposis coli (APC) family	Interproscan
IPR041257	Repeat	Adenomatous polyposis coli (APC) repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12607	ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001708	Biological Process	cell fate specification	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005881	Cellular Component	cytoplasmic microtubule	Interproscan
GO:0007026	Biological Process	negative regulation of microtubule depolymerization	Interproscan
GO:0007389	Biological Process	pattern specification process	Interproscan
GO:0007399	Biological Process	nervous system development	Interproscan
GO:0008013	Molecular Function	beta-catenin binding	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0016055	Biological Process	Wnt signaling pathway	Interproscan
GO:0016342	Cellular Component	catenin complex	Interproscan
GO:0016477	Biological Process	cell migration	Interproscan
GO:0030178	Biological Process	negative regulation of Wnt signaling pathway	Interproscan
GO:0030877	Cellular Component	beta-catenin destruction complex	Interproscan
GO:0045295	Molecular Function	gamma-catenin binding	Interproscan
GO:0045595	Biological Process	regulation of cell differentiation	Interproscan
GO:0045732	Biological Process	positive regulation of protein catabolic process	Interproscan
GO:0090090	Biological Process	negative regulation of canonical Wnt signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-