| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ENSTGOP00000002784.1 | COLLAGEN ALPHA | chr1 | 53770648 | 53776771 | + |
| CDS | |||||
| ENSTGOT00000003091.1 | |||||
| Transcript |
| ENSTGOT00000003091 |
| Protein |
| ENSTGOP00000002784.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF14670 | FXa_inhibition | Coagulation Factor Xa inhibitory site | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR002035 | Domain | von Willebrand factor, type A | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR036465 | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR050149 | Family | Collagen superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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