| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ENSTGOP00000001066.1 | THROMBOSPONDIN | chr8 | 5308014 | 5316649 | + |
| CDS | |||||
| ENSTGOT00000001189.1 | |||||
| Transcript |
| ENSTGOT00000001189 |
| Protein |
| ENSTGOP00000001066.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00754 | F5_F8_type_C | F5/8 type C domain | Domain | Interproscan |
| PF02412 | TSP_3 | Thrombospondin type 3 repeat | Domain | Interproscan |
| PF05735 | TSP_C | Thrombospondin C-terminal region | Family | Interproscan |
| PF12947 | EGF_3 | EGF domain | Domain | Interproscan |
| PF13306 | LRR_5 | BspA type Leucine rich repeat region (6 copies) | Repeat | Interproscan |
| PF13855 | LRR_8 | Leucine rich repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000421 | Domain | Coagulation factor 5/8 C-terminal domain | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR003367 | Repeat | Thrombospondin, type 3-like repeat | Interproscan |
| IPR003591 | Repeat | Leucine-rich repeat, typical subtype | Interproscan |
| IPR008859 | Domain | Thrombospondin, C-terminal | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR017897 | Repeat | Thrombospondin, type 3 repeat | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR024731 | Domain | EGF domain | Interproscan |
| IPR026906 | Repeat | BspA-type LRR region | Interproscan |
| IPR028974 | Homologous_superfamily | TSP type-3 repeat | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10199 | THROMBOSPONDIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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