Gene detail

Detailed information of ENSTGOP00000000759.1 in Osedax fenrisi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSTGOP00000000759.1	SLIT HOMOLOG	chr1	62051039	62051769	+

Gene Structure

More details in Jbrowse Sequence

CDS

ENSTGOT00000000853.1

ATGTTACGATACCCATTGTTATGCGTGCTATTGTTGTCGACTTCATTGTTCTCGTCGACACTGCAGTCGTCCCCCATTGAACAATTCGTCAGAAAACTGTCGTCGCAGAACCACGTTGATCTGATCATCGTTACCGACAGATCTATGTCCGTGGGTACTGAGCGATACTTCAAAAGCACAAAATCTTTCATGCGAGACTTACTGATACAATACATATCATCTGGTAACGGTAACATCAGAGGAGCTCTGCTTTCGTTCGGAGGAACTGAGGTCAGCGTCCTGTACGATGACATCACTAGTATTGCTAATAATCCAGGAATTTATCCAACGAAATGTGCTGCTCTCAAAAATTACATTAATGCAACTCTGAAAGTTGGAGAAGGAAATAAGATGAAGGAATCCCTCACTAAAGCAATTGATATATTTAAAAATGGCAACCGTAATGTAAACAAAACTCACAAGATATTACTATGGGTTACAGATGGAAATTATCAAGTAGATGAAAATCCTTCAGAAACAATCGAAGAACTTAAAAAAGATGTTACACTTTTTATTTGCGGTTTGGGACAATATACAATAGATAATGCCTTCAAGATGTCTACGTTTGCCACTAAATTCAATGGAACATCTTACTACGCCCCTTTCTCATCAGTTGAAACTAACATCAAGAATGAGGAAACCTGGTCATCGCTTTTGAAAAATAAATATATTACTTCTTACGTGAAAGGTCCCGGTAGCAACGTATCCGATGAAGCGCCCACGTTTGTCACCGATAGTGACTCATCAGTCTGTGAAGCTGGCTGTATCATCAACTCGATCTGTCAATGTGATATACTGAGAGGGGTAACCGAGTGTAGATGTGAAGCCGGCTACTATCTTAAACAAGACCACTGCACTCTATGTCCATCGGGTACCTATAAAACTAGCATTGGTAACGAGAAGTGTGATACGTGTCCAGTCTGCGATGATTGTACAAGTACTAAAGTAGGAAGCACTGACTTCAAGGATTGTGAATGTTCCCAAACGTGTAAAGATCCATGCGACAATAAAAAGTGCAGTGGTAACGAAGAATGTGACAAGTACGATGGTAAATGTAAATGTATAACAGGATGGACCGGCACAGATTGCCTGACCAATCAGAATGATTGCATTAATAACAAGTGTTTGAATGGAGCAACATGCGTAGACATGCTCGGTGATTACGCATGTATCTGTAGGTGGGGTTATCTCGGAAGGCACTGTGAAATAAATTTCGATGAATGTTCTTATAACCTTTGTTCAACTGGTTCTATCAATTGTATAGATTTGGAAAACAATTTTAAATGCAACTGTTCGGATCCTGATGATAAATCATTATTTTGTATCCCAACTCATTTTACAACTCAAGTACCAACTACCTCAAAACCTATCTTAGAAACAACATCACAAAAAACCTTAAAAACAACCTCACAAACAACCTCACAAACAACCTCACAAACAACATCAATCACAATTAAAACTTCTGAAACTACATCAAAAGAACCAATAACGACATCTAGTCAGGAAGTAACTACACAATCTACCAAAGACCATGGCGTAACACCAACTAAAGGTCCAGTCAATAAGACCACATCAAATAAGATTTACATATATATTGGAATAGCTGCATTAATCCTTGTTATCATTGCCATCGTCATACTTTGTTGTGTGATGTCTAAGCGAAGAAAAAGACGACATCACGATGAAGATACAAAATCTGCTGTCGGAATTTATGAATCAAGTGAGATTGCGGATCTACCAAGGAATCCAGATGGAACCATTTCCAGAAACTTCTATGGATTATGGAAAAAGAAAACTGTAAGAGGCCGAACTGAAGCTTACCCCCACCAATCCAAGGGTGAAACAAATTTGGCTTACACAAATGAAGGATTTGAAGGTGAAAATAGTGGACTGAATAGAATACAAGAAGTTTACATGAATAGTCAGGATACAACTGAAGGTCGAGGTATGATAATCACTGGAGGTCCCGATGGTGATATCATGGATGGATGGAAAAATTATCTTAGTCAGTTAATCAATAAAAAAGTCATAGAAGCAGCTATCATTGTTAAGCCAGATGGTTCCAGTCGAGCTAAAACTGATACTTGGCAAATTGATTTCGACGAAATCAAAAAACTTACGGCAATACTAGAAGAGCAGCAATTAAATGTTCCCGCCCACGCGCAACAAAATGAGTTCCACATCACGTACAATGAAGCTGGTAATTCTGCTGGTGGTGCCTCGTTCGACGGCTTACGTCTACTGCGTATCTGTCGCACAAACGACTATCTGTTGGCAGCAATCTGTTCTGCCATAACGGATGGGGAACAACATTGCAGGAAGGAACTCGAGTGGATTGCTGAGCATATTAAGTCTGAAGGCTATTGA

Transcript

ENSTGOT00000000853

AttgagagagaaagagagtaCTTGGACATTCGTCCGAACACATACGACCTAGTCAGGTGGTGGGGAGAGAGTTAATCATATAGGCACCACAACATCAGTATTAACACGAATCGAGGTGATGTTACGATACCCATTGTTATGCGTGCTATTGTTGTCGACTTCATTGTTCTCGTCGACACTGCAGTCGTCCCCCATTGAACAATTCGTCAGAAAACTGTCGTCGCAGAACCACGTTGATCTGATCATCGTTACCGACAGATCTATGTCCGTGGGTACTGAGCGATACTTCAAAAGCACAAAATCTTTCATGCGAGACTTACTGATACAATACATATCATCTGGTAACGGTAACATCAGAGGAGCTCTGCTTTCGTTCGGAGGAACTGAGGTCAGCGTCCTGTACGATGACATCACTAGTATTGCTAATAATCCAGGAATTTATCCAACGAAATGTGCTGCTctcaaaaattacattaatgCAACTCTGAAAGTTGGAGAAGGAAATAAGATGAAGGAATCCCTCACTAAagcaattgatatatttaaaaatggcAACCGTAATGTAAACAAAACTCACAAGATATTACTATGGGTTACAGATGGAAATTATCAAGTAGATGAAAATCCTTCAGAAACAATCGAAGAACTTAAAAAAGATGTTACACTTTTTATTTGCGGTTTGGGACAATATACAATAGATAATGCCTTCAAGATGTCTACGTTTGCCACTAAATTCAATGGAACATCTTACTACGCCCCTTTCTCATCAGTTGAAACTAACATCAAGAATGAGGAAACCTGGTCATCgcttttgaaaaataaatatattacttcttACGTGAAAGGTCCCGGTAGCAACGTATCCGATGAAGCGCCCACGTTTGTCACCGATAGTGACTCATCAGTCTGTGAAGCTGGCTGTATCATCAACTCGATCTGTCAATGTGATATACTGAGAGGGGTAACCGAGTGTAGATGTGAAGCCGGCTACTATCTTAAACAAGACCACTGCACTCTATGTCCATCGGGTACCTATAAAACTAGCATTGGTAACGAGAAGTGTGATACGTGTCCAGTCTGCGATGATTGTACAAGTACTAAAGTAGGAAGCACTGACTTCAAGGATTGTGAATGTTCCCAAACGTGTAAAGATCCATGCGACAATAAAAAGTGCAGTGGTAACGAAGAATGTGACAAGTACGAtggtaaatgtaaatgtataacaggATGGACCGGCACAGATTGCCTGACCAATCAGAATGATTGCATTAATAACAAGTGTTTGAATGGAGCAACATGCGTAGACATGCTCGGTGATTACGCATGTATCTGTAGGTGGGGTTATCTCGGAAGGCACTGTGAAATAAATTTCGATGAATGTTCTTATAACCTTTGTTCAACTGGTTCTATCAATTGTATAGATTtggaaaacaattttaaatgcAACTGTTCGGATCCTGatgataaatcattattttgtatCCCAACTCATTTTACAACTCAAGTACCAACTACCTCAAAACCTATCTTAGAAACAACATCACAAAAAACCTTAAAAACAACCTCACAAACAACCTCACAAACAACCTCACAAACAACATCAATCACAATTAAAACTTCTGAAACTACATCAAAAGAACCAATAACGACATCTAGTCAGGAAGTAACTACACAATCTACcaaagACCATGGCGTAACACCAACTAAAGGTCCAGTCAATAAGACCACATCAAAtaagatttacatatatattggaATAGCTGCATTAATCCTTGTTATCATTGCCATCGTCATACTTTGTTGTGTGATGTCTAAGCGAAGAAAAAGACGACATCACGATGAAGATACAAAATCTGCTGTCGGAATTTATGAATCAAGTGAGATTGcggATCTACCAAGGAATCCAGATGGAACCATTTCCAGAAACTTCTATGGATTATGGAAAAAGAAAACTGTAAGAGGCCGAACTGAAGCTTACCCCCACCAATCCAAGGGTGAAACAAATTTGGCTTACACAAATGAAGGATTTGAAGGTGAAAATAGTGGACTGAATAGAATACAAGAAGTTTACATGAATAGTCAGGATACAACTGAAGGTCGAGGTATGATAATCACTGGAGGTCCCGATGGTGATATCATGGATGGATGGAAAAATTATCTTAGTCAGTTAATCAATAAAAAAGTCATAGAAGCAGCTATCATTGTTAAGCCAGATGGTTCCAGTCGAGCTAAAACTGATACTTGGCAAATTGATTTCGACGAAATCAAAAAACTTAcgGCAATACTAGAAGAGCAGCAATTAAATGTTCCCGCCCACGCGCAACAAAATGAGTTCCACATCACGTACAATGAAGCTGGTAATTCTGCTGGTGGTGCCTCGTTCGACGGCTTACGTCTACTGCGTATCTGTCGCACAAACGACTATCTGTTGGCAGCAATCTGTTCTGCCATAACGGATGGGGAACAACATTGCAGGAAGGAACTCGAGTGGATTGCTGAGCATATTAAGTCTGAAGGCTATTGATCCACCATGTACACCTCTGCCACCACCatcaacactaccactaccaccaataccatcaccactactactactactactactattactactactactactactactaccactactactgctgctgctgttgCATTTCCATAAGcagatactactactactctatatttataataatttatgaacaaTTATCTAGTTACATTTTtatgattgaatattttaatttcagcCCCTCCAGTCGTTTATCAAAACCACCGACCAAAAGGAGGCcactatttgtatattatcgAATATTATCGAATATACCCATAACTTGTATATTACAGATGCCATAGATTTTGACTATTTCATTTGTTATTTCGAAGAATTTTTATcgagttatatttttatactctTCTaggtatttgtttataaaagcgtgtaatgtattatataacctgAATATTtgcttgtaaataatatttaggatGATTATTGGAGTTTCATATGTTTTGCAATAGGGTTTCATATGAGTACGTTGATTTCATATAATCCAGaacaaatctatttattatgattataaaatacacaaaataatatattgattactttaatatcttttttatatatttatattaactatttaaatagcCCGAAgctaattattgttatatgacCTTTATTATAAAACAACTATAATTGAAgttgaaaataaaaattgtattataaaa

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00235	Profilin	Profilin	Domain	Interproscan
PF07699	Ephrin_rec_like	Tyrosine-protein kinase ephrin type A/B receptor-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR011641	Domain	Tyrosine-protein kinase ephrin type A/B receptor-like	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR036140	Homologous_superfamily	Profilin superfamily	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR048278	Family	Profilin	Interproscan
IPR051355	Family	Notch and Slit guidance protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45836	SLIT HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007411	Biological Process	axon guidance	Interproscan
GO:0008201	Molecular Function	heparin binding	Interproscan
GO:0048495	Molecular Function	Roundabout binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-