| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ENSTGOP00000000261.1 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING | chr1 | 85890733 | 85931559 | + |
| CDS | |||||
| ENSTGOT00000000303.1 | |||||
| Transcript |
| ENSTGOT00000000303 |
| Protein |
| ENSTGOP00000000261.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01189 | Methyltr_RsmB-F | 16S rRNA methyltransferase RsmB/F | Family | Interproscan |
| PF17125 | Methyltr_RsmF_N | N-terminal domain of 16S rRNA methyltransferase RsmF | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001678 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type domain | Interproscan |
| IPR011023 | Domain | Nop2p | Interproscan |
| IPR018314 | Conserved_site | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site | Interproscan |
| IPR023267 | Family | RNA (C5-cytosine) methyltransferase | Interproscan |
| IPR023273 | Family | RNA (C5-cytosine) methyltransferase, NOP2 | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR031341 | Domain | Ribosomal RNA small subunit methyltransferase F, N-terminal | Interproscan |
| IPR049560 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22807 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000470 | Biological Process | maturation of LSU-rRNA | Interproscan |
| GO:0001510 | Biological Process | RNA methylation | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0008168 | Molecular Function | methyltransferase activity | Interproscan |
| GO:0008173 | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0008757 | Molecular Function | S-adenosylmethionine-dependent methyltransferase activity | Interproscan |
| GO:0009383 | Molecular Function | rRNA (cytosine-C5-)-methyltransferase activity | Interproscan |
| GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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