Gene detail

Detailed information of ENSQHTP00000030169.1 in Bathymodiolus brooksi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSQHTP00000030169.1	SYNAPTIC ADHESION-LIKE MOLECULE SALM	8	110740594	110818934	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSQHTT00000030170.1

ATGGATTTAAAAATAAAACATTTGTGTCTTCATTTAGGACGACTCTTAGTACTTTGTTGGATCACAAGAGGAGTATTTGGTCAGACTTGTCCACGTTCATGTACACGATGTGAAGTCAATGCACTAGGAGACGTCGAAAATGTCACATGCAGTGATGCAAATGATTTTAAGCTGGTTCCCAAAACTGTGAAAAATCTTGTGTTTGAGAATGGACAGGTACCAGTAGGAACTCTCAAAGATTTTTATTTTTTAGGAATTGACAATCTTGAAACTGTAAAAATAACAAATTTCAAAATAAGAGATCTTTGGGGTTCAGTTTTTATCAATTGTACAGAATTAAAATCGTTGGATTTTTCAAAAAACGTAATCCGTTATCTGCTAAAATCTAATTTCAAAGGTCCTTTAGCATTGGAAGTATTGAATTTCAACAAAAACAATATTCCCGAATTGAATGACAATGTATTTGAAGACCTATCATCTTTGACTGAGCTTCATTTAGCCAACAACAAATTAAAAAAAATCACAAACAGAACTTTCGGTGGATTAATTAATCTCAAAATGTTGGATCTCGCGGGTAATCAAATTAATTCAATCGGATCAAGCGGATTTCAAATGATGGTAAATATTAGACAAATTTCCTTGATGTCTAATAAGCTAACAACCGTATCTTCTGGATTATTTAATGGATTATCTACCCTGAAAGTTTTAAAACTTTTGAAAAATTGGATATCAAGTGTTTCAAACAATGCATTTATCGGAACAGGAATTACAAATCTAGATTTGTCAAGTAATAAAATCACAGATATACCGACCGAAGTTCTACAACAAGTGTCTGGAAATGACACCTTTGTGGCATTACAATACAATTCCATTCAAATCTTGAAAAAGGAGAGTTTGTCAAAAGTTGAACTACAATTTCTCAATTTGGCTTTAAATGGGATGAAATTGGTCCAAAATTATGCAACTTTGCAATGTCGTGTGAAATATATTAATTTTGCTGCCAACAAGTTGAAAACATTACCCCCAACAATGGAGGATTATTTAAATTCTCAAATAAACCCAGAAATTATTCTCTACAACAATCCACTTTCGTGTGACTGTGATCTATTATGGCTTGGAAAACTTCTCACACACAAGACATGGAGAAGAAGAATTCCAACATGCTCTCAACCATCAAAGTTTGCCAGACAAAATGTGACTGCATTCTATTACCAAGCACAAGATATTTGTTTGACAACAACTGTCATTTCAACAACAAGCTCTGAAATGACAAACGAACTATCAAGCTCTACACAAACAACAAAGTCCTTCAACAACACAATACAAACAACAATAATGCAATCATCAACCAACACACAAACATCAACATCTTCAAACAACACAGAAACAACAGAATCTTTAAGCAGCACACACACTAATCCACAAAATATAGAACTTCAATCAACAGATAATCCACAAAATACAGTGCTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAACACAGAACTTCAATCAACAGATAATCCACAAAATACAGCACTTCAATCAACATTTAATCCACAAAATACAGAACTTAAATCAACAGTTAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACGAAAAACAGAACTTCAATCAACAAATAATCCACAAAATACAGAACTTCAAACAACAGATAATCCACAAAATACAGAACTTCAACCAACAGATAATCCACAAAATACAGCACTTCAATCAACAGATAATCCACAAAATATAGAACTTCAATTAACAGTTACTCCACAAAATACAGAACTTCAACCAACAGATAATCCACAAAATACAGAATTTCAACCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATTCACAAAATACAAAATTGCCAACAGATAATCCACAAAATACAGAACTTCAATCAACAAATAATCCACAAATTACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATATAGAACTTCAATCAACAGATAATCAACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACACAACTTCAACCAACATATAATCCACAAAATACAGCACATCAATCAACAGATAATCCACAAAACACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATACACAAAATACAGAACTTCAATCAACATTTAATCCACAAAATTCAGAACTTCAATCAACATTTAATCCACAAAATACAGAACTTCAATCTACAAATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAATTTCAATCAACAGATAATCCACAAATTACAAAACTTCAATCAACAGATAATCCACAAAATACAGCACTTCAATCAACATTTAATCCACAAAATACAGAACCTCAATCAACAAGTAATCCACAAAATACAGAACTTAAATCAACATTTAATCCACAAAATGAAGAACTTCAATCAACAGATAATCCACAAAACACAGAACTTCAATCAACAGAAAATCCACACAATACAGAACTTCAATCAACAGTTAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAGCTTCAAACAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAATTACAGAACTCCAATCAACAGATAATTTACCAAATACAGAACTTCAATCAACAGTTAACCCACAAAATACAGAACTTCAATCAACAGTTAATCCACAAAATACAGAACTTCAAACAACAGAAAATCAACAAAATACAGAACTTCAATCAACAGATAATCAACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTCCAATCAACAGATAATCCACAAAATATAGAACTTCAAACAACAGAAAATCAACAAAATACAGAACTTCAATCAACAGATAATCAACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATGCAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAAACAACAGATAATCCACAAAATACCAAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGTTAATCCACAAAATACAGAACTTCAATCAACAGTTAATCCACAAAATACAGAACTTCAATCAACTGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGATCTACAAACAACAGATAACCAACAAAATACCGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGATAATCCACAAAATACAGAACTTCAATCAACAGTTAATCCACAAAACACAGAACTTCAATCAACAGTTAATCCACAAAATACAGAACTTCAATCAACTGATAATCCACAAATTACAGAACTTCAATCAACAGATAATCCACATAATACAAAATTACCAACAACAGAAAATCCACTTAACACAACCAATGACAACCAACCATCAACAACAACCAATGAAAACAAACCATCCACCACATCCAATGGCAACCAACCATCCACAACAACAACCAATGGCAAACATCAATCCACAATTACAGAGACTGACATTAGATCAACAACATTTACATTAAATAACAGTCAACAAACCATAACTTTAACAACTCAAACAAAAGGACAAAATATTCCTGAAACAACAACAGGACAAACACCAACTGTTTCTGAGACCACCACAGGACAAACACCAACTGTTTCTGAGACCAGAACAGGACAAACACCAACTGTTTCTGAGGCCACAATAGGACAAACACCAACTATTTCTGAGACCACAACAGGACAAATATCAACTGTTTCTGAGGTCACAACAGGACAAACACAAACAGTTTCTGAGGTCACAACAGGACAAACATCAACTGTTTCTGAGGCCACAATAGGACAAACATCAACTGTTTCTGAGACCACAACAGGACAAACATCAACTGTTTCTGAGGCCACAACAGGACAAACACAAACAGTTTCTGAGGTCACAACAGGACAAACACCAACTGTTTCTGAGACCACAACAGGACAAACATCAACTGTTTCTGAGGTCACAACAGGACAAACATCAACTGTTTCTGAGACCACAACAGGACAAACATCAACTGTTTCTGAGGTCACAACAGGACAAACATCAACTGTTTCTGAGGCCACAATAGGACAAACACCAACTTTTTCTGAGACCACAATAGGACAAACACCAACTGTTTCTGAGACCACAACAGGACAAACACCAACTGTTTTTGAGGCCACAACAGGACAAACACCAACTGTTTCTGAGATAACAGGACAAATACCAACTGTTTCTGAGACCACAACAGGACAAACACCAACTGTTTCTGAGACCACAACAGGACAACCACCAACTGTTTCTGAGATCACAACAGGACAAACACAAATTGTTTCTGAGGTCACAATAGGACTAACATCAACTGTTTCTGAGACCACAATAGAACAAACTTCAATTGTTTCTAATACCACAACAGAACAGACATCAACTGTTTCTGAGACGACCACAGGACAAACACCAACTGTTTTTGAGACCACAACAGGACAAACACCAACTGTTTCTGAGACCACAACAGGACAAACACCAACTGTTTCTGAGTCCACAATAGGACAAATATCAACTGTTTCTGAGACCACAACAGGACAAACACCAACTGTTTCTGAGACCACAACAGGACAAACACCAACTGTTTCTGAGTCCACAATAGGACAAATATCAACTGTTTCTGAGACCACAACAGGACAAACACCAACTGTTTCTGAGACCACAACAGGACAAACACCAACTGTTTCTGAGGCCACAACAGGACAAACACAAACTGTTGATGAGACCACAACAGGACAAACACCAACTGTTTCCAAGACCACAACAGGACAACCATCAACTGTTTCTGGGGCAACAACAGGACACACATCAACTGTTTCTGAAACCACAATAGGACAAACTACAACTGTTTCTGTGACCACAATAGGACAAATACCAACTGAGACCACAAAAGGACCAACACAAACTCTTTTTACTGCCACAAAAAGGCAAACCATTTCTGTTTCTGGGGCAACAAAAGGACAAACACAAACTGTTTCCACTGCCACAAAAGGACAGACAATTAGTCCTATAGTCACAAAAGGAAACACAACAACTATTTCTACAGCCACAAAGGGACAAACTGCCTCTATTGTTTCCATGACAACAAAAGAAGAAACAACATATGTTTCCATTCCCACTAAAGGAAAAACAACTTCTGTTCCTGTAACCACAAAAGGAAACACAACCACTCTTTCTATGGCCACAAAGGGACAAACTGCCTCTGTTACCATGACAACAAAAGAACAAACGATATCTTTTGCCATTCCCACTAAAGGAAAAACAACTTCTGTTCCTGTAACCACAAAAGGAAAAACAACCACTCTTTCTATGGCCACAAAGAAACAAACAGCTTCTGTTCCCATGACAGCAAAAGGACAAACAACCGCTGTAGTCACAAATGGACAAAGTGCTTCAAAACATAATTCTACAAAAGCACAAACAGTTATTTCTAAATATACGACAGGACGAACAACTTCTACGCCTGTTCTTACTAATGGCAATACAATGTCTGCACCAATGGCAACAACACCTATTGTCAAGGTCACAAAAGGTCAAACTTCAGTGTCTGTATCAATGAATAAACTAACAACTTATTCACAGACCAAGAAGGCAAAAACATCCATTTTGAGTAGTGATAATCCCGTAACAACGACTCCTCCAATTTCGACAACAAACAATTTGACAAATTTTCAAAATGACAAAAGTCAAGCTTTTAATTTTGTGTCTATTGGAATTCCAATTATTGTAATACTTGTCGTAGTTTTTGTAATAATTCTAGGATTTCTTTTACGAAAAAGATTTTATAGCGAAAATGGTGATCGATATGGACTGTTACAAAAATATCACAAAAACATGTGGAAATATTATGAAGGATTCGACAGGGACCCATTAGGTCCTGCTAAGCCAGTGTTTATGCATAAAATTATTACTGATAAGAAAACAAGCTCTAATGTGTAA

Transcript

Protein

ENSQHTP00000030169.1

MDLKIKHLCLHLGRLLVLCWITRGVFGQTCPRSCTRCEVNALGDVENVTCSDANDFKLVPKTVKNLVFENGQVPVGTLKDFYFLGIDNLETVKITNFKIRDLWGSVFINCTELKSLDFSKNVIRYLLKSNFKGPLALEVLNFNKNNIPELNDNVFEDLSSLTELHLANNKLKKITNRTFGGLINLKMLDLAGNQINSIGSSGFQMMVNIRQISLMSNKLTTVSSGLFNGLSTLKVLKLLKNWISSVSNNAFIGTGITNLDLSSNKITDIPTEVLQQVSGNDTFVALQYNSIQILKKESLSKVELQFLNLALNGMKLVQNYATLQCRVKYINFAANKLKTLPPTMEDYLNSQINPEIILYNNPLSCDCDLLWLGKLLTHKTWRRRIPTCSQPSKFARQNVTAFYYQAQDICLTTTVISTTSSEMTNELSSSTQTTKSFNNTIQTTIMQSSTNTQTSTSSNNTETTESLSSTHTNPQNIELQSTDNPQNTVLQSTDNPQNTELQSTDNPQNTELQSTDNPQNTELQSTDNPQNTALQSTFNPQNTELKSTVNPQNTELQSTDNPRKTELQSTNNPQNTELQTTDNPQNTELQPTDNPQNTALQSTDNPQNIELQLTVTPQNTELQPTDNPQNTEFQPTDNPQNTELQSTDNSQNTKLPTDNPQNTELQSTNNPQITELQSTDNPQNTELQSTDNPQNIELQSTDNQQNTELQSTDNPQNTQLQPTYNPQNTAHQSTDNPQNTELQSTDNPQNTELQSTDNTQNTELQSTFNPQNSELQSTFNPQNTELQSTNNPQNTELQSTDNPQNTEFQSTDNPQITKLQSTDNPQNTALQSTFNPQNTEPQSTSNPQNTELKSTFNPQNEELQSTDNPQNTELQSTENPHNTELQSTVNPQNTELQSTDNPQNTELQSTDNPQNTELQSTDNPQNTELQTTDNPQNTELQSTDNPQITELQSTDNLPNTELQSTVNPQNTELQSTVNPQNTELQTTENQQNTELQSTDNQQNTELQSTDNPQNTELQSTDNPQNIELQTTENQQNTELQSTDNQQNTELQSTDNPQNAELQSTDNPQNTELQTTDNPQNTKLQSTDNPQNTELQSTDNPQNTELQSTVNPQNTELQSTVNPQNTELQSTDNPQNTELQSTDNPQNTELQSTDNPQNTDLQTTDNQQNTELQSTDNPQNTELQSTDNPQNTELQSTDNPQNTELQSTVNPQNTELQSTVNPQNTELQSTDNPQITELQSTDNPHNTKLPTTENPLNTTNDNQPSTTTNENKPSTTSNGNQPSTTTTNGKHQSTITETDIRSTTFTLNNSQQTITLTTQTKGQNIPETTTGQTPTVSETTTGQTPTVSETRTGQTPTVSEATIGQTPTISETTTGQISTVSEVTTGQTQTVSEVTTGQTSTVSEATIGQTSTVSETTTGQTSTVSEATTGQTQTVSEVTTGQTPTVSETTTGQTSTVSEVTTGQTSTVSETTTGQTSTVSEVTTGQTSTVSEATIGQTPTFSETTIGQTPTVSETTTGQTPTVFEATTGQTPTVSEITGQIPTVSETTTGQTPTVSETTTGQPPTVSEITTGQTQIVSEVTIGLTSTVSETTIEQTSIVSNTTTEQTSTVSETTTGQTPTVFETTTGQTPTVSETTTGQTPTVSESTIGQISTVSETTTGQTPTVSETTTGQTPTVSESTIGQISTVSETTTGQTPTVSETTTGQTPTVSEATTGQTQTVDETTTGQTPTVSKTTTGQPSTVSGATTGHTSTVSETTIGQTTTVSVTTIGQIPTETTKGPTQTLFTATKRQTISVSGATKGQTQTVSTATKGQTISPIVTKGNTTTISTATKGQTASIVSMTTKEETTYVSIPTKGKTTSVPVTTKGNTTTLSMATKGQTASVTMTTKEQTISFAIPTKGKTTSVPVTTKGKTTTLSMATKKQTASVPMTAKGQTTAVVTNGQSASKHNSTKAQTVISKYTTGRTTSTPVLTNGNTMSAPMATTPIVKVTKGQTSVSVSMNKLTTYSQTKKAKTSILSSDNPVTTTPPISTTNNLTNFQNDKSQAFNFVSIGIPIIVILVVVFVIILGFLLRKRFYSENGDRYGLLQKYHKNMWKYYEGFDRDPLGPAKPVFMHKIITDKKTSSNV

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF21410	MAP6	Microtubule-associated protein 6	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000483	Domain	Cysteine-rich flanking region, C-terminal	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR007882	Family	Microtubule-associated protein 6	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR050467	Family	Leucine-rich repeat and fibronectin type-III domain-containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45842	SYNAPTIC ADHESION-LIKE MOLECULE SALM	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-