Gene detail

Detailed information of ENSQHTP00000001859.1 in Bathymodiolus brooksi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSQHTP00000001859.1	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 3	1	94969126	95001503	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSQHTT00000001859.1

ATGTCAGCTGAATACAGTCATCAAGTATTGAAGGTTTGTGTGGCACAATTATGTCAGAATCTAGGATGGAACTCAACACAATCAACACCATTAGAACTTCTTACAGATGTCTTGGAGCGTTACATATTAGAAGTTGGCAAAGTAACACACAGATATGCAGAACAGTTTGGTAGAACAGAACCAACTGTAGATGACATTGGCTTAGCTTTCCGCCATTTAATTGTCAGTCCAAGTGAATTAGAAGAATATATTACAAATGCAGACCCTGTTCCATATGCCCACGATGTGGTGGCATTTCCTGTTCCAAAGAAGAATAATCTACAGTTCCCTAAACCTGGAAGTAGAGAGGTTGCAACTAGGGATGAATCTATACCAGAATATATGCCATTGATGCACCCAGAGTTGGAAGAAGAGGAACCATCATCAGCTTCTACCCTGACCAGTTCTGACATGGGTTTGATGGGACTGTTACAACAACCTACAACAAATACAATGCTGCTGAGTCCTACAGAGGCCACAACTGTAGATAAACATTCACTTACACCACCAGATGGTCCTCCTTTTAAAAGGAGAAGATTAGACAGTGGTGCATTACCAGAAGAAGCAGGTCCTTCATTGTATGAAATGAAGAGTATCATTATATCAACATCTGGTGATCTGACCCCAACTCATGGAAAAGCTGGAAAACTGCCTGATCCCAGGACACCACCACAAGGACATCCCAAAAAACTCAAAGATTCTCCAAAAGTATCTCCAAATAAATCTAAAAAGCTATTTGAAAAAGAAAAATCTGATTCTAATAAAGAACAAATACAAAGAGACTTGTTTTCAGAAACAGTAACTATCACAACATCATATGATAAGTCAGACAAGGAAATTGTCAAGTCCAAATCTACAGTTATTACTCCTGCTGGATATGAACCAAGATCTAAAACACCAGGTCATGCCAAAAGTCTGAAGGGTCCAGGACGGCCTCCAGGTAGACCTCCAAAAAGTCCAGGTAGGCCTCCATTAAAAAGGAGTCCTGGTAGACCACCTATGCAGAGAAGTCCAGGAAGACCCCCATTATCCAGAAGTCCTGGAAGATCACCATTTCAAAGAAGCCCAGGAAGACCTCCTTTACATAGGAGTCCTAGTAGGCCTCACTCTGGGAGAAGCCCTGGTAGACCTCCAAAAAGTCCTCGAGGAAGACCACGGGGATTCATTCCAGTTGTTGTAAGGCCAAATCCTACGGCAGAACTAGAAAAAATAGAAAGGAAAATACTTGAAACTTTGTCACCTCAACATCAACCATCTACAGAAGAAGTCAAAGAAACTGCTACTCCAGTTGCTGAACCCTTTGACTTATCAACTTCTACAAAAGAATCAGATGACTCTAAGCAAGAAGCTGTTGTAAAGACTGAAGATAATGATGAAGGTTCACAAGACAAACTGATGATTGTAGAACAAGCCCACAGACCTCGTGGTAGACCTCCCATTAGTCCAGAGAAAAAGATGGCAAGATTGGCAAACATTGATTATATCATACAATCTGTTATTGAAAAATCAGCAGTAGATCAAGATAATGAAAAGAAACAAATTAAACCACTTAGTGATTCTGTTGATGAAACAGGTATTAAAATTGAGATCGACCAAGACAGTAATTCAGTTGTTAATGAAGAAGAGTCATTTGATGCATATGTCACAAATGTGACCCTGGATGACCTCCAGGATAAGGTTGAACCCGAAATCACAGTAAAAACTGAAGCAGTCGATGTTAAAGATAGTTCAGATTCTAACAAAGACAATGTAAATATTGTTGTACCTGCAGTTGAAAAAAAATCTCCTGTTCCCCTTAAAGTACCTCTGCTGGTTTCACCACCAAAAAGAAAAGGTAGGCCACCAGGGTCTGGCAAAAAGAAATTCACTTCCTTCAAAGAAAAGTCTAAACTTAAACAAAAAGTTTTATCAGAAACAATAAGTGAAGTTAACATCGTTGACAACAAATCACCATTTACAAAATCTGAATCTGTTAATTCTGTGAATCAAGAGGCAAATCCATGGATGGCAGCCATGTCTGCTGCTGGGTTAGCAGTATCCATAAGACCTCCTGAACCAGAAGAAGACACTCAACCAGCTACTGTTGAGATGGATATTGCAGAAACGATAGAGGTGGAAAATGAAACTGTGGAAGTGAAAAGTGAACCAGTAGAAATGCTCAAGGAGGAGGGCAAGGAGGAAAAGAAAACGAAGGAAAAGGACAAATCTGAAAAACCAAAGGAACATAAAAGGAAGAAAGAAAAGAAGAAGAAAAATAAAAATAAGGACAGAGATAAAGAAAAAAGCAAAAAAGATAAGATGTATTTTCCAAAGTTGAAAATAAAGTTTGGTGGATCCTCTTCTACCTGTGAAAGTGTAATAATGTCTCCTAGAACGGAATCATCACCAAACGAATCTCCACGACAAGAGGGCTTAAAATTAGTTATTAAGACTTTACCTCATGTATCAAGTTCTGAAACCAAACCTTCATCTCCATCAATTTCATCAATAAAGAAGGAGTCTAAATCTAAAGTATCAGAAATCAAGAAAGAACCTGCTGCTGCCAAGATGGGTCTTGTGATTGAGGAGGAACCCCCTATCCTTACTCCAGAACCTCCTAAGACAGAGACGCCACCCCCTCCAGTTCTTAAAGCACCTTCCCCAGTTCATCACAAGAACCCTAGTCCTCTTTCCATTCCACAGCTGCCCATCAGAATTCCATCCCCAGCCCCACCAAATTTATCTTATTCTTTGACATCAACTGCTCAGCCCCCACGCAAACATGAGCCACAAGACCATCATCATGAAGCAAGTAAATTTCCTTCACCTGCTCCCACAGAGACAAAGTCTTCCCCTGTGCATTCCCCATCCACACCCCCATATTCCCCACCTGAGTCCCCAATAGAGCAGGTTAATTCCCCTCACAGTGACACACCTTCCACCAGTCCATATCATTCCCCATCCCCTTCACCAGGCCCTTCTAATCCCCGGGAAAAGTTTGAGCTGCCCCCTATGCCTCCACCTTCCATTGTACCTCCACCTCCTCCTCCATCCAAGCCATCAGTACAAAGAACAGTTGTGGCAGAGACAATTGGAACCTTTATAATTATATCCTCTCGAAAACGGGCATTTGCTGGATGTGTGAGACAAATCAAATACACAATTTGCCCTTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07524	Bromo_TP	Bromodomain associated	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006565	Domain	Bromodomain associated domain	Interproscan
IPR009072	Homologous_superfamily	Histone-fold	Interproscan
IPR017956	Conserved_site	AT hook, DNA-binding motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46452	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002039	Molecular Function	p53 binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005669	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-