Gene detail

Detailed information of ENSQHTP00000000081.1 in Bathymodiolus brooksi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSQHTP00000000081.1	ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER	1	147181151	147187685	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSQHTT00000000082.1

ATGGGAAATAAAAAAGTTGCAAAGGGTGCGCTGATTTGTGTTTTGATTGCAATTGGTGCTAAAAAATTGTCCCCAAAGATACGAAGAACTTTATATGGACAAACAAGCAAATCTCTGTCACTAAATGAAAATGAATCAGATAATGCCAAAAGAAGTAGAGCAAGTCTCAATAAAGAATTTTATAGACAATTACGATATCTCTTAAAAATTTTATTCCCAGGAATATGGAATCAATCATTTGGTATCTTAACTCTGCATACTGCAACACTGATTGCCAGAACATTTTTAACAATTTATGTCTCAATGTTAGATGGCAAAATTGTAAGAACAATTGTTAGACGTGATCTCAAATCTTTTCTGTTACGGTTATCACAATGGCTTCTTATTGCAATTCCAGCTACTTTTATCAACAGTCTCATACGATACTTAGAGAGTGAACTTGGATTGAAACTTAGAACAAGTTTAGTTGACCATGCTTACAATCTTTACTTTGACAATCAAACATATTATAGAGTTAGCAATTTAGATAGTAGACTAGCAAATGTTGATCAATGTCTGACTGATGATATTACTATGTTTACACAGTCTCTTGCACATTTGTATTCCCATCTTACAAAGCCACTGCTTGATGTCACATTAATGTCTTTCACTTTGTATACACTGGCAAGCAGAAGAGGTGCAAGTTCAAAATATCCCTCTATGTTGGCATCAGTTGTTGTAGTTATAACGGCACAAATTTTGAAAGCTGTATCACCAAGATTTGGAAAACTTGTTGCAGAGGAAGCTAGACTGAAAGGAGACCTAAGATTTATACATTCAAGAGTCATTGCAAATGCAGAAGAAATTGCTTTCTATGGTGGTCACAAGGTAGAGTTAAACCTTTTACAACATTGCTACAAAAAATTAGCAGATCAAATGCATATGATATTTAATAAAAGACTATGGTATATCATGTTGGAGCAGTTCTTAATGAAATATGTCTGGAGTTCAAGTGGTTTAATAATGGTAGCAATACCTATACTTACTGCAAAAGAAGGGGGAATACGTTCTGATGGATCAAAAGTTGATGATGACCCAGACGGTGGTGTTAGTGAAAGAACGAAAGCATTCACAACAGCAAGAAATTTATTAATAAATACTGCTGATGCTATAGAAAGAATGATGTCTTCATTAAAGGAGATAACTGAGCTGGCTGGGTATACATCCAGGGTCTCAGAAATGTTTGAGACTTTCAATGATATCAGTGTGGGCAAATATAAAAGAGCAACTGTTATAAAGCAAATAAATAGCAAATCAAATCTGGAGAAAATTTCTGGTCCACTGGAAATAAAAGGTGAAATTGTTGATACAGAGTCAGTTATTGATATAGAAGACTTAGCTATCATTACACCTAATGGTGATGTTATTATATCCAGTCTTACAATGACACCAGGTATGCACCTACTTATAACTGGACCCAATGGCTGTGGTAAATCATCACTGTTTAGAATATTTAGTGGACTATGGCCTGTTTATAAGGGAAAACTACACAAGCCACCTCCTAGTTCTATGTTCTACATTCCTCAAAGACCTTACATGACATTAGGGACATTGAGAGACCAAGTAATTTATCCAGACAATGTTGAGGATATGCAGAGAAAAGGACTGACGGATGAAGACTTAATGAATATTCTTCATGTAGTCAACTTACAACAGATAGTAGATAGAGAAGGGGGTTGGGATTCTGTAAGTGATTGGAAGGATGTATTGTCAGGAGGAGAGAAACAAAGAATGGGAATGGCTAGGATATTCTATCAGAAACCACAGTATGCCCTGTTAGATGAGTGTACCAGTGCAGTGTCTATAGACGTAGAGAGTAAGATATACCAGACAGTAAAAGACAGTGGAATTATTTTGTTGACAATCACACATAGACCATCTTTGTGGAAATTCCATACTCATCTATTACAATTTGACGGAGAAGGAGGGTGGAGAATGGAAGAACTTGATACTAATACTCGTCTGTCTCTTAATGAAGAGAAACAGAAACTAGAGACACAGTTGGCAGGTGTTCCTAAGATGCACCATAGGTTGCAGGAGTTGTGTTCTGTTTTAGGAGAAGATTCGGTGCTGTTAAACAGGCATGGTAGCATTGCCAATATTGCCTCCTTGTCTGAGAGTTGA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF06472	ABC_membrane_2	ABC transporter transmembrane region 2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR050835	Family	ATP-binding cassette sub-family D	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11384	ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005324	Molecular Function	long-chain fatty acid transmembrane transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005778	Cellular Component	peroxisomal membrane	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan
GO:0007031	Biological Process	peroxisome organization	Interproscan
GO:0015910	Biological Process	long-chain fatty acid import into peroxisome	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0042760	Biological Process	very long-chain fatty acid catabolic process	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-