Gene detail

Detailed information of ENSJPOP00000017443.1 in Oasisia sp. SBJ-2009 Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSJPOP00000017443.1	RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN	OZ024855.1	55204784	55251903	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

ENSJPOP00000017443

CGTTGTGTGGTCGATACCGGGCTACTACACGATATCGCAGATACCTCCTCGCCACGCTTACAGCTCACAGCAAGGGGACAGACCTCGCCACGCTCACAGCAAGGGGACATACCTCGCAGCGACAGCGACACGTCGACGCACAAAGCACTGAAGGCCCTCTCCTTTTCGACATAGACGAttcttccctggcagaccaCAGCGACTGATCACTCAGACTAGAACGAGCCGCCGCCCGAGCTCGACACCGATGGAGGCGACCAGCAACCTGCTGGGCCGGGCGAGCCTGCCCCACTACCAGGCGGTCGCCAACACCGTCAGCAGCAGCATCGTGTCCGGCTCGCCGCCCCAGGACATCCGCCGGTCGCTGAACGGCTGGAACTACGCCGGCCCCGACCCGGCGTCCGTCCTGTCGCACGGCACATGCAACTTCGGTCCGTACGCGCCGCCACTCGGCGCCGGGCCGGGCGTCGGACACAAGCCGACGTACGCGACCTTCACGAGCGCCGCCGATTACCTGCCGCCGAACTGCCAGCAGCTGCAGCTCGCCAACCAGCTCAACCCGTTGAACACGCTCGCCGGGCCGCGAAATGTCCCCAACTTCCCATTCTACGGCGACATGTACCAGCCGAACCCGCCCGGCATGACGGGAACGGGACTCTTCTCCGACTTCACGTCCCTCCCCGCAATCCCGCGCTTCGATGCCGAGCCCGCGCCGCCCTACATGAACGAGGCGACGCCGCAGAACTCAGACCAACCTCGACAGCGAAAGAAACGAAAACCTTACACACGCTACCAGACGATGGTCTTAGAAAACGAATTCATGAGCAATTCGTATATTACTCGTCAAAAGAGGTGGGAGATCTCATGTAAACTGCACCTCTCCGAAAGACAGGTGAAAGTGTGGTTTCAAAACAGACGGATGAAGCGAAAAAAGTTAAATGATCGAGCGAAAGCGCTCATCAAGGACCCAATGGAGGAGGCAAATATAAACTCAGCCGGTGCTTCAGGCTAATCCGTGTCACTGACTATAACTATACTCGTCCGTCGCTTCGTTTCCGTCTCGTCTGCATAATAAGTAATTACTTCATTGAATGTGAATCGACGGTTACCGATGGCACGACTGTCTCCAGATACAAAATGTGGCGACCAAGTTTTTGGCCTATGTATGGTCGATGCATAGCTACAGCACATGGGATTGGCTAGTGGCCGCTCGCAGTACGAGCGGTAGTGTTGTCTCGCGTTGTCTTGTCGGTGAATCGTGACGTCATCGGTGCATCTTGGCGTCATCGTCGCTCGCCACGTGGTATATATATTCATGCGTCATGCTAATCGCAATACAGGGTCTGGCAAGGCGACACTCGTCAATTTGAAGTGCAGTGGAATATGTCAGTTGTAGGTCAAACACGCTTTGGCTCATGTGTGTAatactatatacataaacaaaacatatagaAGCACCAGTGCCATTTTGCAGACGTAAACatatgacatacacacatacctacgCCTACATACGTTCACTTTGATGTCAATACGCCGACATCTGAAAGAATATGTTTTAAGTAGTACGTAAATTTTATAGATGTGAATCATACGAAGGACAAAGTGTTGTATGGACGCAACACGCATGCGTGTGACGTCATAAATACAGTAGCATCTGTGCTAACAGACCCGTGCTCGCCTGTTATGTCACTATTAGGTAAACATACAATTGTCTACAAAAACAAATGTGCcataattaaatacatattttatttatatgtaaaatagGAGGCAATGGCATAGGCGACACTAGAATGACGTCACACCTTGTTACGGTAGCTGGACTTAATCATCTTACTGGGTCTGTGGTTTTATGTAACTTACACATCAATTTTACAACACACGTCTTGAATACAGTTACAACGCACGATGAAATCCATTGGCTTCAATTTGATATTTTCCTGAAGCAGGGTGTCGTTAGCGTAGAAAGATTACGTgttcattaatatattaattgtgCACAAATAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13540	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000408	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR009091	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR053035	Family	Mitochondrial GEF domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46337	RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0019843	Molecular Function	rRNA binding	Interproscan
GO:0070131	Biological Process	positive regulation of mitochondrial translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-