Gene detail

Detailed information of ENSJPOP00000008858.1 in Oasisia sp. SBJ-2009 Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSJPOP00000008858.1	DNA POLYMERASE ALPHA CATALYTIC SUBUNIT	OZ024861.1	24141196	24157245	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

ENSJPOP00000008858

AAACAACGTGCGTCGTTCGCGGGGACACACGGACGGCAGTCAGCGTCGATGATGGTCGTGCTACGGAACTTGGGGGGAACGGTCCGCAAACTTGTCTTACCGCTATGTCGAAAACACGCGAATGCGTTGACAATAGGCAGATCACACGTCAAGTTTATGTCGACAAGACTTTGTATTGATCCATCATCAAATCTCACAGACGAGCAGCATCACATTCAGGAGTTGGCAAGAGATTTTGCAAAGAATGAATTTGCTCCGAACATGTTCACTTGGGATGAGCAGGAGATATTCCCTGAGGAAGCGCTTCAACACGCAGCCAAGCTGGGTTTTGCGGGCATCTACTGCAGCGAAGAGTATGGTGGAACAGGGCTGAAACGAATTGATGCTTCAATCATATTTGAGGCACTAGCTGAAGGCTGTGTTAGCACCACTGCTTACCTCACCATCCACAACATGTGTGCGTGGATGGTGGATGAGTTTGGCAGTGAGACACTGAGGGAGAAATGGATTCCGGAACTTGTCTCAATGAACAAATTTGCCTCCTATTGCCTCACGGAACCAGCTAGTGGCAGTGATGCAGCGGCCTTAAAGACAACTGCAAAACTGGATGGCGATAACTACATTCTCAATGGCACGAAGTCATTCATCAGTGGGGGAGGAAACAGTGACGTGTATCTGGTGATGTGTCGGACTGGTGAGGCGGGGCCCAAGGGGATCTCGTGTGTCCTCGTGGAGAAGGGAACTGAAGGGCTGCACTATGGACAGAAGGAGAAGAAGTTGGGGTGGAACTCTCAGCCGACACGCCAAGTGATCATGGACAACTGTGTTGTACCGGTCTCTAACCGCATCGGCAAAGAGGGTCAGGGGTTCAACATCGCCATGAAGGGTATCAACGGAGGGCGACTTAGCATTTCCTCGTGTTCCCTGGGGGCAGCACAGGCCAGCATCGAGGCCGCGCGGGAACAGCTTGAAGTACGCAAGCAGTTTGGGAACTATCTGAGAGACTTCCAGTACCTTCAGTTCAAGTTGGCTGACATGGCGTCCCGACTGGTTGCGTCGCGTCTCATGGTGCGTAATGCAGCCGCAGCGCTCGACGCGAAGACTTCTGACCACTTGGCACTGTGTGCAATGGCCAAGCTGTTTGCCACAGAGAACTGTACAGACATCTGCAATGATGCCCTGCAGATGTTTGGTGGTTACGGCTATTTGAAGACATACCCCGTACAACAATACTACCGTGACGCTCGGGTACACCAAATCCTTGAAGGAACCAATGAGATCATGAGAATGCTGGTGGCCCGAGACTTGCTGCGTTCATGAGCGTCCTTTTTTGTCAACAACCGTCACAAAAACCGACGTCTTTGTCAAACTGCTGTGACCATTCTGTGAATCCAGGATATATTTAGATATTAATGAGTTAGATTTATAACTTTTTTTGGACAACCGTCTTATTTGGTTATTGCTGTTAATTAACATGTTTTAATGATGTAGATTGAATATGTGCAAATGAGGATTTGCTATACACAGGGTGCAGTTGTTTAAGTTTGCAAACATGAGATTATATCTCTTATTATAGTCAGTATTATGATATGTGACATATGACAAtcagttgtattattatttgcactGTGTACTCATTACTGAATTAATGCCTTCTTTAAAGACACAGTCTAATAGTTGCTATTCTagaattatgttatatattctaATCTAGACATATGGCAACTAAACCAATTGCAATACCTTAGCTATGTTCTGAATGTGTTTTGATCAAAGTTGAAACAcagttaaaatataattatgaataccAACCACCATGATATTAGAATTACACTTTATAATAGGATTTATCAAGACACTTTGTATCTTTAATAGGTGCAGTTAAGTTGTTAATTTACATATTGTGCCCATTTGTGTGGTATCTACAGCTGTGCTGTACAAACATTTTGTCCACTCCAAAATATTGTGTGCATCTTGTGTAAGACAATCTTAATTGTGTACTGTTGGAATAACTCAGGTAGaggaaatatatttttaatcacTATAGTATCTATACTATGATTATTACACATTTTTTCAATGTTTTTTGATTGCTATATAACGAAGAGTATATTTTCGTGTGGTTAATTCTATGGTACCTACAGTATTCTGAGCACTATTAACAAATGCAGTTGCATCACAAGCTTTAACATGTGCTATACTACAGTAGTGTATTATGTAAATGACGTGTACGTCAAGTCTTTGAGGATGCAATAAATACAATTTGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03104	DNA_pol_B_exo1	DNA polymerase family B, exonuclease domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006133	Domain	DNA-directed DNA polymerase, family B, exonuclease domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45861	DNA POLYMERASE ALPHA CATALYTIC SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0003688	Molecular Function	DNA replication origin binding	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0005658	Cellular Component	alpha DNA polymerase:primase complex	Interproscan
GO:0006272	Biological Process	leading strand elongation	Interproscan
GO:0006273	Biological Process	lagging strand elongation	Interproscan
GO:1902975	Biological Process	mitotic DNA replication initiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-