Detailed information of CsqKR_Scaf99_17.17 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf99_17.17ZINC FINGER MYND DOMAIN-CONTAININGchr91347753213494033+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439BromodomainBromodomainDomainInterproscan
PF00855PWWPPWWP domainDomainInterproscan
PF01753zf-MYNDMYND fingerDomainInterproscan
PF21524SAMD1_WHSAM domain-containing protein 1, WH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000313DomainPWWP domainInterproscan
IPR001487DomainBromodomainInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR047268DomainZinc finger MYND domain-containing protein 11, PWWP domainInterproscan
IPR047269FamilyZinc finger MYND domain-containing protein 11Interproscan
IPR048589DomainSAM domain-containing protein 1-like, WH domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46379ZINC FINGER MYND DOMAIN-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0009966Biological Processregulation of signal transductionInterproscan
GO:0034243Biological Processregulation of transcription elongation by RNA polymerase IIInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf99_17.17 global RNA-seq network
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