Gene detail

Detailed information of CsqKR_Scaf99_14.25 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf99_14.25	DUAL SPECIFICITY PROTEIN PHOSPHATASE 19	chr9	13819101	13823146	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf99_14.25

GGAAAGTACACAAGCGATCAATTTCAATGAAGATGTTTGTAAACATAGTCAGAAAGTTTAATCGGTTTGTTATGATGAATGTTTTCGATTGGAAACTTAATTTCGTTCATTAACTTTTAAATAAATACAGGGTCGTTCTACATGTAGGTGAACACTGAATTCTCTAGGAAATTAAGAACTGAAGAAGGCTTTAGATATTTAACTAAAATTATCAGTGACAAAGATGGCAGAAGAGATCAATACCGTTAACCATTGTTCCTTACCTCCACCCAGCAAACTGACACAGCTACTGGCAACATTTGACAAACTCAAGTTACGTAAAACCGACACAAAAGTGACAACTGTTGATGGAAGACAGATAGTAGAAGGAAAGGATGAAGATGGGAGAGTGGTTATTAAGAGTATTAGCACTGGTGAGCTTGGTTATGTTGGAGATGTGAGACAAGATCTACAAGTGGGAGAAGTACTGCCTGGACTTATCATGGGCTCACAGGATGTTGCTCACAATCTGGATATCCTGACATCCTACAAAGTGACTCACATCCTCAACTGTGCCACTCTGGTTGAAAATCTCTTCCCGTACAAATTTAAATATCTGACAATTGAACTGCGTGACACCCCAGAGACAGAAATCATGCAGCATTTTGAAAAAGCTGTAAACTTCATTGAAGAAGGGCGGAGAGAAGGGTGTGTCCTGGTGCACTGCAATGCTGGGGTGTCCAGGTCAGCAACGTTTGTCATTGCGTACCTGATGCAACAAAAAGGTATGAGTTTTGAAAAAGCTTTCAAGTACTTGAGAACAAAAAGAGAGAAAACCTGTCCAAATCCAGGGTTTGTAGCCCAGTTACAGGCATTTCAGGAATTGTTGAAGAAGAAAAAAGTTAAAAAACTGAAAAATCCAAAATAAGATAAATTCAGAAATGTTTATGTGCAATGTTGAAATAGTGATTTGTTTTACTACAGTATGTTGCTACTGATACTTAATCGTAACAACTGAAGATTACAAACTCTACAATGTTTCATCATGTTGCAGAAACCATAACAATGTATTTCACAAATTTTTCACTTTTACTGCACTACATAAATTAACATCTTGTTAATGATTTCAAAACCAGGTGATATGGTTTGACATGAACAATAGTTCTTGTTTGTGTTTGCACAGGACATTTCTGTGAGGGCAAACAGCTGTTCAAATCACACACATACTTACTTGAAATGACTGTGAACTTTCACAGAGGACAGTTGCTCTTCTGCAGTTTATGACTTCCACTTTTCAGATTATTGTGAAATGTTCATGACACAAATTTTATCTTGATTACAATACTTTCTATGCACAACACAGACATAATGCAGGTATTAATTACAGATTTTATTGATCCTGTATAATGCTGTATTTTTTAAAGTTATAGAATTTTCATATTTTCTTACAGAATATTGTGCTTGTTATATTCTATATATTCATTTATTTTGAATTGTTATTGATGCATTTTCTTTTGCATTTTTACACTTATCTTGGAATGTTTAACAAACTTATTTATGAGTTGGACTGTGGAAGTTTTATTCTTCTATCTACTTTTGTATAGTTATATAAATTAGTTTGTAATCAAAAAAATGTCTTATGCTTGCTACTGATCTGACTTATTATTGTCATTCATGATTTTACGACATCTACTTACTACTTCTCAGTTTCCATTTACTAATATAGTTTCGTTACTAACACAGTTTATTCTCTGTCACCTTTTCTAAATCAAAAGTATTAGATTTCTTATAATTATCTTGCACATTTTATCATAGAGCCATAGCATTTGGCATATTCCTCAAATTATCACTGCAAACATACATCAACTTGTCAAATTTAAAAATAAAATGTTTCCAACTTACTTCTATTAGAATCATACAGGATATACTTTAATGTGCAATATAATTAATCAAAATTCTGACTGTTAACAAGTTACTTCACTTGTTGAAAACAGTGAGTTAGAAAAAATGTCTGTAATATGCAAATACTTGTGTTTTACACCTGTTATGTGAGGTAATCACATTAACTAATAATTTTCTCTGTATGAGAAGGATAGACTCAGTCTTTAGGTGAATGTATAAAAAAAAAACAGATGTAAGAGTTTATAAGAACAACTAAAAGATTATTTCTTTCATGTTTGTATGGGTATATATTAAAAACGAGTGAAAACATTTTGTTCATAAAGGGTTCTATCAATACCATGCCTAGATCTGTTTTCGTGAGTCAAGTCCATGCATATTATTATTGATATTATATACTAAATATATGAGTCTACATACTTTTGTGTATAACTGTGATATATTTATGTATTATTTTTCATGCTCAAGTTTGGATGTGACAACGAATGTGATACATTTACTTTTAGTATCACAAGTAAATTTTTAAATTTAGTCTTATATTTATTAGCCTCTGAAGTATCTTTTGATCTCAAATGACTGTATTCCAGTTGATGTTTCCACTGGTGTGTAAACAGAAATCATTAATTACCAGCTTCTACAAGCAATGTAAGGTATATCAAGATTAATTAAGGTGTTCATAAATATCCTTTCTTAGAAACTGAACATAATCTGAATTATTTCATTTTACAGACAGTGTTTATCAGTGTATTTCCTAAAAAAAAAAAAAATTACAAAATGTTTTCTATACACTTAAGAATTTATTACCTTTTTTCTGTTAATGAAAATAACAGGCTTTTTCACATGACACTATTTGTCAGTTTCCTAGTCATTTTTCATTTATAAATTATT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00782	DSPc	Dual specificity phosphatase, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000340	Domain	Dual specificity phosphatase, catalytic domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR020422	Domain	Dual specificity protein phosphatase domain	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46377	DUAL SPECIFICITY PROTEIN PHOSPHATASE 19	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0008579	Molecular Function	JUN kinase phosphatase activity	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0043405	Biological Process	regulation of MAP kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf99_14.25 global RNA-seq network