Gene detail

Detailed information of CsqKR_Scaf98_6.16 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf98_6.16	GLUTATHIONE REDUCTASE	chr7	34031433	34050016	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf98_6.16

ATTATATATAATAATAATAATAATAATGTTTTTTTCTTTAACTCTTAGGCCTTTATATATAATGAACAGACTAGAAATTGTAAATAATAACAGGAGTAAAGGTGATGTGGTACGTGTATGAGTTACTAAAGAGACTATACATTGCTGCTTGCAGTTCATTTGTTGAAAATGGACGAAATCTTAAATCATAAAATAAATGTGGACAAAATGATAGTTAACTTAGTGCAGAGAAACACAAAACATCAATGTAAAATAAATAAGAGTAGAAAAAAAATCTGGCGACAACATTATAAATAATATTAACGATGAAAGCTCTTATTGGATCGTAAAAAAGAACTAAGGTGACCTAGTATAGTTAAACCGTTACGTCATTGGTCACGTGACAAAGGGTATTCCACAAAGCTGGCCAGTCACATACATAGAATATGTACTGAAGGAAGTCATCTGGTTTTTCTCCGAGTTCATTAGGACTTACAGGTGACACATAAACTGACATCATTAAACGATCACGGTCTCCATCAGACTCAAACACATCTGGCAAGAAGAAGATGCCTCCTGCCGGCCTTTCCAGTGACATCAAGACTGAGATAGAAATATCCATCAAGAACAACCATGTGATGGTTTTTAGCAAATCAAAATGTCCTTACTGCCTCAAGATAAAGGACCTTTTACAACATTTGAATGTTGAGTACAAAGCACTGGAACTGGATCTAATAAAACACACAGACAAGTATCAGCAGATTCTGAAAGAACTGACAGGACGCAAGACAGTGCCACTTGTGTTTATTGGTGGAAAGTTCATCGTCATTGGTGGTGGTTCTGGAGGGCTGGCAGCAGCAAAGGAAGCAGCAGGTTTTGGAAGAAAAGTAGCTCTGCTAGATTTTGTAAAACCCAGTCCGCAGGGAACAACTTGGGGTCTTGGAGGAACCTGTGTAAATGTTGGGTGCATTCCTAAGAAATTAATGCACAAGGCATCTTTACTAGGAGAGGATCTGAATGATGCCCCCAGTTTTGGCTGGGACCTGAAACCAGAAGGAATTAGACACAGGTGGACTGAAATGGTGCAGAATATTCAGGACCACATCGGTTCACTGAACTGGAACTACAGGGTGCAGTTGCGTGACAAAGATGTCAATTACGTGAACGCTCAAGGAGAATTTGTTGGTGAACACACAATAAAGGCAACAAACAAGAAAGGTAAATCTGAAGAGATGACTGCCGAACATTTTATCATAGCCACAGGTGAACGACCACGATATCCAGACATACCAGGTGTGAAAGAGTTTGCAATTACCAGTGATGATCTCTTTTCTTTGCCCTACCCCCCTGGCAAAACGCTGTGTGTTGGGGCCTCCTACGTCTCGCTCGAGTGTGCTGGGTTCCTCCGTGGGCTTGGCTTTGACGTCACGGTCATGGTGAGGTCAATCCTGCTCCGAGGATTCGATCAGCAGATGGCGAACATGATTGGCGTTGTCATGGAAAAGCAAGGAGTGAAGTTCATACGGGAAGCTGTTCCAACCAAGATAGAAAAAATTAAAGATGGCGAACCAGGAAAGTATCGTGTATATGCAAAAGGAAATGATGGCAAAGAAATTGTTGATGAATATAATACAATTCTTTATGCAATAGGAAGAGATCCATGTACCAACGGGATTGGCTTGGAAAAACTCACTCCCGTGGCCATCCAGGCAGGCAAGCTGCTTGCCCAGAGACTCTACGACAGCTCCCCAGTGCTGGCAAGTTGTAAAAAACAACACATTTATGTGTACCACAATAACTTTCTTCCCCTGGAGTGGACTGTGTCACACAGAGACCCAAGTCTGTGTTACGCAAAACTGATCTGTCTAATACCTGAAGGGCAAAGAGTAATTGGTCTCCATGTACTCAGCCCTAACGCAGGGGAGATAACTCAAGGCTACGCTATAGGAATGAAGAAAGGGGCCACAAAGTTTGATTTCGACAACACGATAGGAATCCATCCCACCTGCACTGAAACATTCACAACTCTGAATGTGACTAAGAGCAGTGGGGAGGCGACAGATGCAGGAGGATGCTGAGGTTAGATCCCTGCTGCCTGGACTCCACAACCAACGTTCCACATCCAGTATGACATCCACTAATTTTGATGTTTTAAAAGCTGAAAAAATCAGAAGAATCTTCATACTTCAGATACGAAAAGAGATGCCAAACCTTTATCTACATTCCTTGTTTTAATCAGAATCTGATCCTAACATGTCTATTATTATTATTATTATTGTGAGAGGAATATATCTAAGACTAAGCACATGAAGAATTTTGTAAAAGGAACACTTGTTACTTTGTGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00462	Glutaredoxin	Glutaredoxin	Domain	Interproscan
PF02852	Pyr_redox_dim	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Domain	Interproscan
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002109	Domain	Glutaredoxin	Interproscan
IPR004099	Domain	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Interproscan
IPR012999	Active_site	Pyridine nucleotide-disulphide oxidoreductase, class I, active site	Interproscan
IPR016156	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR036249	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR046952	Family	Glutathione reductase/thioredoxin reductase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42737	GLUTATHIONE REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004362	Molecular Function	glutathione-disulfide reductase (NADPH) activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006749	Biological Process	glutathione metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016668	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	Interproscan
GO:0034599	Biological Process	cellular response to oxidative stress	Interproscan
GO:0045454	Biological Process	cell redox homeostasis	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf98_6.16 global RNA-seq network