Gene detail

Detailed information of CsqKR_Scaf98_26.16 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf98_26.16	UNCHARACTERIZED	chr7	35994583	36004012	+

Gene Structure

More details in Jbrowse Sequence

CDS

CsqKR_Scaf98_26.16

ATGTCTGATACAAATATCACTGAAGAACCTGGTCCTGATTCAGCTGAACAGCCAGCTGATGTGGCTGCCAATGAACCAGTTGAAACTGAACCAGGAGAAGCACAACCAGTAGAAACTGAACCAGGAGAAACACAACCAGAGGAAACTGAACCAGCTGAAATTGAACCAGCTGAAACTGAACCAGCTGAAACTGAACCAGTGGAAACTGAGCCAGCTGAAACTGAACCAGGAGAAACACAACCAGTGGAAACTGAACCAGGAGAAACTGAACCAGTGGAAACTGAACCAGCAGAAACTGAACCAGTGGAAACTGAACCAGTTGAAACACAACCAGTTGAAACACAACCAGTGGAAACTGAACCAGTGGAAACTGAACAAGCAGAAACAGAGCCAGGAGAGAGTGGCGTGCAGCAACCTGAACCTGTTGCAGTTCATTCTAGGGAACGCGTGCTGTCCGCAACTGACAGATCAGAACAGGTGCTGACAGCAGAGGAGGTTGAGAGAGAACGGTCTAGGATGGAAGCAGCACCAGCAGGTGATGAAATGTTGACTGGAGACACAGCAGAGATGAAATCTTCAGCTGAAGCTGAGCTAGAGAAACGTGAAGATAAACTTCACCCTGAGGAACGTAACAAAATTCAGCGAGAGTCTAAACAAGTTGGAGATGACATTCCCATGGAGAAAGAAGAGAAAATTAAAATTTCACCCAAAGACAAAGTGAAAAAGCCAGTCAATCTAAATGCCAATGCAACAGTGAAGTTTGTTCTCATGCCAAGTGGACAGGTTATTACTCTGGCCTGCACCCTGGGACAAACTCTCAAGCAGCTCAAGGAACATTTTGCTACAGAACTTAAGATGCCCTTCAACCTCATTCTTCTCATGTATGATGGTAAAACAATGCCTGATGAAACAACTCTGGCAGATCTGGGTGTCGGTCCAAATGGAACAGTGCAGTTAGAACTGCAGTCAGCAGATCCAATAAACATGCCTATAAAGGCATACAGGCCTCGGCAGGAATACCACATGCCTGATGTGATCACAGTGAGAGTTATCGGAGAGGATGGAAATGCACGTGAGGTGATTGTAGAAATAGAGAGAACAACGAGAAAGAAGCCGTACCTGGGTGGGTACCGTCACAAAGAAACTGGCATCGAGTTCCACAACGCGTCCGCACAGACTGTTAAAAAACAACGCCCACCCCCACCCGTTGAGCGGTACTGCCGAGACACCCAGACAACCGAACAGTGGCACCGGCTGCAGCAGACCAGCAACGACATGTCCACTCAGATGACCAAGATAGGCGTGTACGTGGCCAATCTGACAGACAAACTCATTGAACCACAGACGTACATCACAGCCGATGAGCATCTTCAAGGTATCCTTCAAAAGATTATTATTCTTCAAAAGTACTACAGACGATGGCTGGCCAGAAAGAGAGTTAAGAAACTGAAGGAGGACAGGGACAGGAGGATGGAATGGGAAAGACAGGAGGAGTTGAGGAAGAGGAAGGAGAAGGAGGAGAGGATCAGAAAGGAGTTTGCCAGGAGGATGAATCCAAAGAACAAGGATGATTTTGATCTCCTGTATCATGCACTTGAAAAGTGGAGACTGGAGGAGATAGAGAGAATCAACAGCACACTGACAGGAGCAGAACGCAAAGCAGCTCTTTACATGTTGTTAGATCAGGAAACACAGCTGCTGTCTGCCATTGACCGTCACAAGCTGGAGGCAGATGACAACAACAAGAAACTGAGAATTTTAACTTTCCTAGACAAGGCTGCTTCTCCTAAGAAGTGGAAAGGTCCGGATGGCAAGCCGACACTGATGGACACACCATTCACCATTCGAGCTCGTGAACTGAAAGACATCTACAACAGCATCAACATGAAATACCTGACACAGGACGAGCGTCTTGACGTCCTCCTCACTCTCAAACACACAGTCAAAGAACACGACTGTAAGCTCACTCAGGAGATAATTGAGTTGATTGACAGAGAGGCTGATCTGCTGATGAGAGGAGTGAGAGAGGGAAACCTTGATGGCTTGAGAAAGAGGATTGCCACTCTGTTTTTACAGTACATCAAGACTCCCACGTTCAACCCAGAGGCAGCCAAACTGCTCAAAGTTCCACAGGATCCAACCATGTTGCGGAAGAACATCTACTTCTGTTCCGGCTGCAACAATTACCTCCCTTCGACAGAGTTCCCTCTCTCTTCGAACTCTCGCGTAGTGGGCAAGTGTCGCCAGTGTAACAAGGTGGACAACGACGGGCGAGTGAGACAGGACTACAGTCACTACAGGTACATGCTGAAAATGCTGAGACGCTCAGAGGAGATTTACGATGATGACTCTCAGATTGCCTTCCTCCTACAGGAGAGTGACTTGCGTTACCTAGTTGAGAACATCTGGAGCAGTCAGAGCACGCTCAGTGCATGGGACGACATGTTTGATCTTGTCCTTGTCAGGTGGGACAAGCATGAAGAGTGGTCTCCCTGGAACTGTATACTGCTCACCAAAGATGAGGCAGAAGCTCATGAGAAACTTGAGAGTCTAGAAGAGGGCTATGGTCAGGTGTTTATTCACAAGGTGAAACAAAAACACACGCTGGCCAGAAACTACTTCTCCCGTCTTCCTGGCATGGCTGAGCTGGTCCGCAAGAGAGCCAGCCAGAAGAACACAGGGACCAGGGGTCCTTCAGTTGCAGGGACATCAGTGTCAGTACAACAGAAAGCTTAG

Transcript

CsqKR_Scaf98_26.16

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR037695	Family	IQ motif and ubiquitin-like domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21074	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001669	Cellular Component	acrosomal vesicle	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0031514	Cellular Component	motile cilium	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf98_26.16 global RNA-seq network