Gene detail

Detailed information of CsqKR_Scaf95_7.9 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf95_7.9	CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEIN	chr6	39871727	39877698	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf95_7.9

GTAGATATAAAACAAGAACCACAAAGTGAGGAAGACAGTTTTAATTTATCTACCTCACTGATGCTGTCGAGTGCCAATGAGAGTGACAGTAATTTATCACTGCCCAGTGGTATGCAAGTCCCAGACATCGTTAAAACTCAAGTTACTAATTTAGAAATACAGACATCAGCATTTACTTGGGTTTTTCACATATTTGTGTAATTGTTTTGTGTCAGTTAGATATCTGGACATTAAGCAGTCTAAAATTAGATTAGTTTAGAATACTTTTTTTAATTAGTTTCTAAGAAAACTAGAGTAATTGTTTGTAATTCGCTTCTTTTTAACTGACAAATCTGGGAATTAAAATTATTCAAAAGTGGAGATAAAACAGAGATTTTTAAAATTTGAAATGTAAAGTCATTTAACACTTGAATACTTACTAGAATAATTTAGGATCAGCTTAGCTAGTTTTATCAGTTGTAAATTTTCAAAAAACTTGATAAAAAGGAAACTAAAATACTAATCACTGGTATTTTGTTATTTTGTTAGCAACAATTTCAGAGATGTTTCAGATGGGAGAAGAAAACGCAGCATCAGACAGTGAAATGGAAATAGACCCTGGATCAATGATGGATCCTCAAACACATTCTCTTCCTCCTTCATCTTTCAGTATAGAGGACATGTTGTCTTCTCTAGATGGAAAAAACGAACCCGCTAATAATTCATCGTCTGCTGTAAGTACAGTGAAAAAAGTCAACAATGTTTCTCCTAAGATAAAAACTGGAGACAGTGATGATGATAAAAGTGAAACTGACAGTGAAGATGTACCTTCTGAACCTCCTGTAGTTGAAGAAGATGACAAAAACAAAAAAACTGATGAAAACTTAAAAACACAAGAAACTGACACAGCCCAGACGCCTCCTGTGAAAATAGTTCCTATGAGTCTGTATGAGGAACATCAACTGCTGAAAAAACTGAATGCTGCTGACAGCAAAATGAAACTGGATCCCGAGTTAAAACGACTGCAGCGAAAACTGGCAGTGAGACAGATAAAAAGAGAAAGAGGGCAGCCTGAGTTTGATCTTGATGCTGTGGTGAAACGACTCATTCGACCTCACTGGATGACTGATCAGGATTCTGATAATATGAAATATTTACATTCGGTTGGTTGCCCAGTATCAACATACCAGTCTTCTAATCTGAGAATACTTGATCGTTTCCAGACAGGATATCGATCAGTACCTGTAATGTCAGACAGAAAGGTTTCTTTTCTAAACAGACTGGTGGGTACAGAGGATGACCAGCTACAGAGCATCTGCAGTCCTTATACCACAAGAATTTTAAAACCTTTTATTCGTCGTGATTATGAAAGTAGACCTTTGAAAATGAAACTTCTTCAAGAAATTCAGGCTTACCCACACAGGAATGATCCATCATGGAAAAGCCTGCCACCCCCACCTATAGATTACTGCTATGTACGCCCTCAACACATTCCTTCTGTTAATGTTCTCTGCAGAGAATTCTTCTGGCCTGGAATTGATTTGTCTGAGTGTTTGCAATATCCAGATTTTAGCTGTGTAGTTTTATACAGGAAAATTGTGATAGGATTTGCTTTCATGGTGCCTGATGTAAAATACAACGAAGCCTACATCTCATTTATCTTCACCCATCCTGAATGGAGAAGAGCTGGGATAGCAAAGTTTATGTTGTACCATCTCATACAGACTTGTCTTGGAAAGGATGTCACACTGCATGTGTCTGCCACCAACCCAGCCATGTTGCTGTATCAGAAGTTTGGTTTCAAGGCTGAAGAATTCATTCTAGACTTTTATGACAAATATTTCCCAGTTAACTCTACTGACTGCAAGCATGCTTTCTTCCTGCGACTCACAAGATAACATTTATAGGAATGACTAGGATGTTAAAAAGAGCTGAATTCCAAAATAAATCATCCTACATCTCATGTGCATAAAATTCACTTGTTGAACTGTTTGAAATTATGGAATAAAAAGTTATTTTTGAATGGAAAGATTCCAACTTCTTTTTATTTATTTGTGGCTATATATATATATATATTTTTTTTAAATTATGAAGATATTTATTTATTAAACATGTCTGAGCAATACCAGCTGGAAAGCAGTTAATTAAATTGAGTTTCTGAATTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00583	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000182	Domain	GNAT domain	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20916	CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004402	Molecular Function	histone acetyltransferase activity	Interproscan
GO:0016573	Biological Process	obsolete histone acetylation	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf95_7.9 global RNA-seq network