Detailed information of CsqKR_Scaf94_10.63 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf94_10.63STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1chr7979588984021+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01541GIY-YIGGIY-YIG catalytic domainDomainInterproscan
PF21202SLX1_CStructure-specific endonuclease subunit SLX1, C-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR027520FamilyStructure-specific endonuclease subunit Slx1Interproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR048749DomainStructure-specific endonuclease subunit SLX1, C-terminal domainInterproscan
IPR050381FamilySLX1 structure-specific endonucleaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR20208STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008821Molecular Functioncrossover junction DNA endonuclease activityInterproscan
GO:0017108Molecular Function5'-flap endonuclease activityInterproscan
GO:0033557Cellular ComponentSlx1-Slx4 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf94_10.63 global RNA-seq network
TOP