Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
CsqKR_Scaf91_14.61 | CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT | chr6 | 4937761 | 4954558 | - |
CDS | |||||
CsqKR_Scaf91_14.61 | |||||
Transcript |
CsqKR_Scaf91_14.61 |
Protein |
CsqKR_Scaf91_14.61 |
Gene family | Subfamily |
---|---|
Transcription Factors Family | bHLH |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00010 | HLH | Helix-loop-helix DNA-binding domain | Domain | Interproscan |
PF14598 | PAS_11 | PAS domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000014 | Domain | PAS domain | Interproscan |
IPR011598 | Domain | Myc-type, basic helix-loop-helix (bHLH) domain | Interproscan |
IPR035965 | Homologous_superfamily | PAS domain superfamily | Interproscan |
IPR036638 | Homologous_superfamily | Helix-loop-helix DNA-binding domain superfamily | Interproscan |
IPR047230 | Family | Circadian locomoter output cycles protein kaput-like | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR46055 | CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
GO:0032922 | Biological Process | circadian regulation of gene expression | Interproscan |
GO:0046983 | Molecular Function | protein dimerization activity | Interproscan |
GO:1990513 | Cellular Component | CLOCK-BMAL transcription complex | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for CsqKR_Scaf91_14.61 global RNA-seq network |