| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf90_25.4 | POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 | chr5 | 1467170 | 1480298 | + |
| CDS | |||||
| CsqKR_Scaf90_25.4 | |||||
| Transcript |
| CsqKR_Scaf90_25.4 |
| Protein |
| CsqKR_Scaf90_25.4 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09732 | CactinC_cactus | Cactus-binding C-terminus of cactin protein | Domain | Interproscan |
| PF10312 | Cactin_mid | Conserved mid region of cactin | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018816 | Domain | Splicing factor cactin, central domain | Interproscan |
| IPR019134 | Domain | Splicing factor Cactin, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21737 | POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0045292 | Biological Process | mRNA cis splicing, via spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf90_25.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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