Gene detail

Detailed information of CsqKR_Scaf90_14.20 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf90_14.20	MENIN	chr1	36924377	36931991	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf90_14.20

GTTTTGTTTCAAGATGGCGGGCTTTGGGCCAAAGGAAAAGGGACATTTCCCGCTCCAGAGTATAGAGTCTGTTGTTGCTTTGTTTAAAGACCAGTTGGAAAATTCAGATGAACCTAATCTTGCTTTATTATCAATTGTGTTAGGATGTATAGAAAATACGCTGACACTGAACCGATCGGTCACTTCAAATGAAGATCGGTCAAAAATTCTTGAACCGATATTTCCAGTTGTGGAGTTATCGACTGTCGAAGCACTGTACGCAAAATTCACTACACTCGTTAAAGGTTCTGTTGACTTATCTCAGTTCACGGAAGAATATACGACGCGAGAATTAGTGAAGAAGGTTTCAGATGTCATATGGAGTTCTTTAACGCGAAGTTACTATAAAGACCGAGCCCATCTTCAATCTCTATACAGTTTCCTAACAGGAAACAAGTTGGACTGTTTTGGTGTTGCTTTAGCTGTAGTTGCTGCCTGTCAGGTTTTGAAAATAAATGATGTCCATCTTGCATTGTCTGAGGACCATGCATGGGTTGTGTTTGGGAAAGATGGTTCAGAAACAGCAGAGGTCACCTGGCATGGAAAAGGGAATGAAGATAAAAGGGGTCAGCCAATCAACATAGGGGTTGCCGAGAAGAGCTGGCTCTATCTAAACGGTCAGCCTGTTGTTTGTTCACGACAGATGGAAGTGGCAGCAATGGTATCCGCAATTAATCCAGCAGTCAACACAACTACTGATAGTGTGGAAATGGGATCTTTACAGCAGGAATTACTTTGGTTACTTTATGACAAGGGACATTTGGCAAGATACCCTATGGCTCTTGGTAACCTTGGTGATTTGGAAGAAATAAGTAAAACACCAAATCGACCACAGCCAATAGAATTGTTCCATGAAGCTATCAAAGCAACACAGAAATATTACAACAGTCAGCATGTTTATCCATACACGTACCTTGGTGGCTACCTGTCTCGGAAACGCCAATACAAAGGCGCAATCAAAGCTTGGGCTGATGCAACATCCGTAGTGAAAAAATATAATTATAATCGTGAGGATGAAGAAATCTATAAGGAGTTTCTTGACATTGCTAATGAACAGATTCCTAAGATTGTGCGTGATGTAGGTAATGAGTGTCGGAAAATGGACACAACAGAACTTCCTCTGCTTCTTGATCCTGAGGTATATGCTGACATTTTGCGTTTCTATGATGGCATTTGTGAATGGGAAGAAGGAAGTTCCACACCAGTACTTCACGTTGGCTGGGCTGTTAAACTTGTGTTTTCTTTGTCTAAATTTGATCCACGGGTTCGGTCTTTTTTGGATGTACATGTTCAGGGTGCAGAGGAGAATGATAGTGACACGAACTCAGAAGTTGGCGATGATGTCGACGGGTAAAGATACATCTGTTAGTAGCACACCTTCCAGTAACATAAAGAGTAGGAGAGGACGTAAAAAATCAAAAGGAACGGAAAGTACAATAAATGATTTCAAGGATGAAATATCTGATGGTAAGAAAATAGAAAATGGAACGTGTAAGAGTGATGGTATTTATCTTAATGGAAAGACTGAGGAGGAACAAATAAAATCAACTATTGAGGACTTGGTGTCTAAAGTTGGTGATGATGCAAAAAATGATAGTCCAAACCCAAACATTGCAGCCCTCACTGAAGCTTGTGGTGTTTCTATATTGAATAAAGACTACTTGCTAGGTGTTGGTGAGCCATTTACAACATCAGTGACAACAACAACATCAGCTACAGTCACAACATCATCGTCGACAACACCTGATCCCCCGGGTAGATTTAAATGAATTTCTCAGTTCTCAGTCAAATGGGACCACATTTATGGGGCTGACTGTTGAGACAATGCTCAAGGCAGAGAGCCCAGCTGACATGATGTTGTGTCGGAAAGGGACAGAAACGAAGCAGGTACTAGATGAGCGTGACATTGATGAGGACTTGTTTTCTAATTGCAATCCAGTTGAGCTGGAACTTCGCAGTGAGAAAATGAAGGGACTGAAGAAACTGCTAACTTCGACTAAGTTGAATTCTAGTGCAATCAAATTACAGCTTACTGCTCAGTCACAGGTCCATCTGAAACATGGTGGTGGAAAGAGAACAAGTGATGTTGATACATCGGGAGGAATGCGGAAACGGTCTCGTAGAGAATAAATTGATGATTTAAAATAAATATTAGTCTGTTAAATATTAAAAAAAACATTTTATTATCAGTTTTAAAAAAAAAAATCATTTATGATTATTTTATTATTATTGTTTTAAATGTCATTTATCAATCATTATGCCTCTTTTTTTCAAAATATTTTTTGCTGTCCATAGCTGTTTGAAAAGATGTCTTTTCGTCCATCTTTTCACAAAGTGTAATATACTGACATTTTATAGAGATATATACTGATGTAACAGATGGGTGATTCTTTCATAAAGAATTGTTTACATCACACCGCAATTCCTGTGTTTTAATAGGTGCCACATCAGTAATACACATATGTGCTGTTCATGACATTCACTTTTGATTCTTTGAAAATGAAATTGTTATAATTTAAAATATTTAAAAAAAAGAAAAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05053	Menin	Menin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007747	Family	Menin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12693	MENIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000403	Molecular Function	Y-form DNA binding	Interproscan
GO:0000785	Cellular Component	chromatin	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008285	Biological Process	negative regulation of cell population proliferation	Interproscan
GO:0035097	Cellular Component	histone methyltransferase complex	Interproscan
GO:0045786	Biological Process	negative regulation of cell cycle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf90_14.20 global RNA-seq network