| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf87_11.17 | DEHYDROGENASES, SHORT CHAIN | chr5 | 5157205 | 5171166 | + |
| CDS | |||||
| CsqKR_Scaf87_11.17 | |||||
| Transcript |
| CsqKR_Scaf87_11.17 |
| Protein |
| CsqKR_Scaf87_11.17 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | Domain | Interproscan |
| PF01575 | MaoC_dehydratas | MaoC like domain | Domain | Interproscan |
| PF02036 | SCP2 | SCP-2 sterol transfer family | Domain | Interproscan |
| PF13452 | MaoC_dehydrat_N | N-terminal half of MaoC dehydratase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002347 | Family | Short-chain dehydrogenase/reductase SDR | Interproscan |
| IPR002539 | Domain | MaoC-like dehydratase domain | Interproscan |
| IPR003033 | Domain | SCP2 sterol-binding domain | Interproscan |
| IPR020904 | Conserved_site | Short-chain dehydrogenase/reductase, conserved site | Interproscan |
| IPR029069 | Homologous_superfamily | HotDog domain superfamily | Interproscan |
| IPR036291 | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR036527 | Homologous_superfamily | SCP2 sterol-binding domain superfamily | Interproscan |
| IPR039569 | Domain | N-terminal of MaoC-like dehydratase | Interproscan |
| IPR051687 | Family | Peroxisomal Beta-Oxidation Enzymes | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45024 | DEHYDROGENASES, SHORT CHAIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf87_11.17 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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