Detailed information of CsqKR_Scaf7_15.58 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf7_15.58RFWD3 PROTEINchr924223712432060-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR037381FamilyE3 ubiquitin-protein ligase RFWD3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR16047RFWD3 PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0036297Biological Processinterstrand cross-link repairInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for CsqKR_Scaf7_15.58 global RNA-seq network
TOP