Detailed information of CsqKR_Scaf75_24.31 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf75_24.31VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28chr61159017511597165-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03997VPS28VPS28 proteinFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007143FamilyVacuolar protein sorting-associated Vps28Interproscan
IPR017898DomainVacuolar protein sorting-associated, VPS28, N-terminalInterproscan
IPR017899DomainVacuolar protein sorting-associated, VPS28, C-terminalInterproscan
IPR037202Homologous_superfamilyESCRT assembly domainInterproscan
IPR037206Homologous_superfamilyVPS28, C-terminal domain superfamilyInterproscan
IPR038358Homologous_superfamilyVPS28, N-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12937VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000813Cellular ComponentESCRT I complexInterproscan
GO:0032509Biological Processendosome transport via multivesicular body sorting pathwayInterproscan
GO:0043328Biological Processprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathwayInterproscan
GO:0044877Molecular Functionprotein-containing complex bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf75_24.31 global RNA-seq network
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