Gene detail

Detailed information of CsqKR_Scaf75_19.24 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf75_19.24	DEDICATOR OF CYTOKINESIS DOCK	chr6	12146380	12156056	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf75_19.24

ATGATTAGAGATCGGACTCCTCCACTTGTGGCTCCTGAAGGAGGTGGGTCACGACTTCGCTGGCGGAAAGATCAGCTACAGTGGAGGCATTCTCTAGAAATACATGAAAGGATTATCCCCCTTCGTCCAAGCCCAAAACCTCGTGATATTGACTCTGATGCACATGTTGAGGGTAGTCTGGCAGCTGAAGTGAGCATGATCTCTCTTGACATCCTCGAAATTATTGTACAGATTGCTCAGGCATCTGAGATGATGAGTCCTTTATTGGGCAGTGCTCTGAGAGTCTTACTTCACATGCTGGGACTGAACCAGAGTGTGCTTGTACTGCAGAACATGTTCGCTATTCAGAGAGCACTGGTTACAAAGTTTCTGGACTTGTTGTTTGAGGAAGAGACAGAGCAATGTGCTGACCTCTGTCTACGACTACTACGACACTGTAGTTCTTGTATCAGCAACACCCGCTCACAGGCCAGCGCCTCCCTCTACCTTCTCATGAGACAGAACTTTGAACTTGGAAATAATTTTGCCCGAGTGAAGATGCAGGTCACAATGTCACTGAGTTCACTTGTTGGACAGAACCAGAACTTCAACGAAGAGTTTTTAAGAAAGTCACTGAAGACAATTTTGACTTATGCTGAGGCTGATGTAGAGTTGCAGGACACCACATTTCCAGAACAGGTGCGAGACTTGGTGTTCAACCTGCACATGATTCTGTCAGACACTGTGAAGATGAAAGAATTCCAGGAGGACCCAGAAATGTTGTTAGACTTGATGTACCGCATCGCCAAGGGTTACCAGACATCTCCAGACCTTCGTCTCACTTGGCTGCAGAACATGGCTGGAAAACACAGCGAGAAAGGAAATCATGCAGAAGCTGCTCAGTGCTTGGTTCATGCTGCAGGTTTGAAAATCACGCCAAACATTCTAGAAGAGAGTGCTGTGTCAGATGATGTGGTGTCACCAGATGAAGAAGGAATCTGTACAGGAAAATACTTCACTGAGAATGGACTGGTTGGCTTGCTGGAACAGGCTGCCAGCTCTTTCACAATGGCGGGGCTATTCGAAGCTGTCAATCAAGTGTACAAGATCCTCCTCCCCATCCACGAGGCAAGTCGAGATTACAAAAAACTGGCTCACATTCACCAGAAACTGCAGGAAGCTTTCAACCAGGTCATCAAACAGTTTGGAGATTTGGATGGAGATGAGTTTATTTACAAAGAGCAGTCAATCACAAAACTCTCTGAGATTTCATTCAGACTTGAGGCCTATATTCAAATCACTTACGTGGAACCTTATTTTGATATGTATGAGTTCAGAGAAAGAATCACCTACTTTGATAAAAACTACAACATCAGGAGATTCATGTATGCCACACCATTCACACTGGATGGTCGAGCCCACGGAGAACTTCACGAACAGTACAAGAGAAAAACCATCCTGACAACAAGTCACAGTTTTCCCTACGTGAAGACTCGCATGCAGGTCATAGAGAGACAACAGATTATTCTGTCTCCAGTAGAAGTTGCAATTGAAGATGTTCAGAAGAAAACCAAAGAACTCGCTTTAGCTTTACGACAAGAACCTCCTGACACCAAGATACTGCAGATGGTCTTGCAGGGTTGTATTGGTACAACTGTCAACCAGGCAAGTACTGGTCCACTTGAAGTGGCGCTGGTGTTTCTAGCCGATGTAGCAGAGGGAAAACAACTTCCTAGTCGACACCACAACAAACTACGCCTGTGTTTTAAAGACTTCCTCAAAAAATGTGGTGACGCACTGCACAGAAACAAGACTCTGATTACACATGAACAGAAGGAATATCAGCGAGAACTGGAGCGTAACTACCACACATTCAAAGAAAAACTTCAACCCATGATCTCTAACTCTGCCACACTCAGACGTTCCAGGCATCACAAGAGCAAAGATGGTAAAGAACGGAAAAGAATTGAACATAATGTTTCAGTGTGTTGAAGATTCCTGGTGAAATGAGAATGTTTAATCAGAAGAATAAAAAGAAAAAAGTTTAACATTTAATCAAAGATAATATTCAATAATGTGTCAAATAAAAGAGCAATCATACCAATGAATATCAGAAATATTTGACAATGGATTTGAACAACACATTTCTGTGTGAAGGGATTAGATGAATATGAGATAAATTTCTGAGAAGGTTATACTGTGATTTTTTATCTGCCAAAAAAACATTGTGTTTACACATAATCTTTACTTCTATTTATACATTAAAAATAAAATCAATGTTCTGTTTTATATCTTCAAAAAAAAAAAAAAAGAAAGTAAAAACATACTTATAGTTATGATGTTAAATGTTAGTCGTGTTATCTCCTACCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06920	DHR-2_Lobe_A	DHR-2, Lobe A	Repeat	Interproscan
PF20421	DHR-2_Lobe_C	DHR-2, Lobe C	Repeat	Interproscan
PF20422	DHR-2_Lobe_B	DHR-2, Lobe B	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026791	Family	Dedicator of cytokinesis	Interproscan
IPR027357	Domain	DOCKER domain	Interproscan
IPR043161	Homologous_superfamily	Dedicator of cytokinesis, C-terminal, lobe A	Interproscan
IPR043162	Homologous_superfamily	Dedicator of cytokinesis, C-terminal, lobe C	Interproscan
IPR046769	Domain	DOCKER, Lobe A	Interproscan
IPR046770	Domain	DOCKER, Lobe B	Interproscan
IPR046773	Domain	DOCKER, Lobe C	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23317	DEDICATOR OF CYTOKINESIS DOCK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf75_19.24 global RNA-seq network