| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf72_13.22 | SORTILIN RELATED | chr8 | 29134341 | 29157877 | - |
| CDS | |||||
| CsqKR_Scaf72_13.22 | |||||
| Transcript |
| CsqKR_Scaf72_13.22 |
| Protein |
| CsqKR_Scaf72_13.22 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00801 | PKD | PKD domain | Domain | Interproscan |
| PF15901 | Sortilin_C | Sortilin, neurotensin receptor 3, C-terminal | Domain | Interproscan |
| PF15902 | Sortilin-Vps10 | Sortilin, neurotensin receptor 3, | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000601 | Domain | PKD domain | Interproscan |
| IPR006581 | Domain | VPS10 | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR022409 | Domain | PKD/Chitinase domain | Interproscan |
| IPR031777 | Domain | Sortilin, C-terminal | Interproscan |
| IPR031778 | Domain | Sortilin, N-terminal | Interproscan |
| IPR035986 | Homologous_superfamily | PKD domain superfamily | Interproscan |
| IPR050310 | Family | VPS10-related sortilin family receptors | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12106 | SORTILIN RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005794 | Cellular Component | Golgi apparatus | Interproscan |
| GO:0006892 | Biological Process | post-Golgi vesicle-mediated transport | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016021 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf72_13.22 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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