Gene detail

Detailed information of CsqKR_Scaf69_14.11 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf69_14.11	NITRIC OXIDE SYNTHASE OXYGENASE	chr7	21290981	21311787	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf69_14.11

GTATTAATGAGCGGTTTGCTGTTTTACATATATTTGCGTATAATTTGCATCCTGTTTAAAGTTTACCATAGCAATGGTTACGTAATTGTATTCTACGTACTGCTAATTCTAATTAATATTAATATGACCGCTTCCTCTGTGAATTGTCGCTGACGACAGTTTCGGTTTCTAGGCAAAGCATGCGTCACTGCAAGTCGTCAAGAAAACACGTGAATACAGGTAAAAAGTGCAGGTAAAAACCCGAGATCAACAGACTGCAGGTTTAGTTTTCAGGAGAAACAAACGAAGAAGTTTTGAGATTGAGAGTCGCTGCTACTAAGATAATATAAAACAAAGAACAAACATGAATAACAAAGGAGGCGGGTGTCCTGTCGACCACGAAGGAAATAATTCTGGACAGAAGAAGTTTTCCAAACTGAGGAATCTGATAAACGAAAAAATTACTGTTGATGTTTTGCACAATAAATGGATCGACAACGTTCCATGTTCAGCAAATCGATGCATGGGATCTTTCATGGCGCCCCCAGTCAAACGCCGTCCGGGTGAAATGCGACCCAAGGAAGAAGTAATGATCCATGCAAAGGATTTCTTGGAGCAGTACTACCAGTCAATAAAAAAATCAAACTCACCAGCACATCAGAAACGCCTGGAGGAAGTGACGTCATCAATCGAGTCCACTGGTACATATGACCTCACAACGAGCGAGCTGGCCTTTGGTGTCAAAACAGCCTGGAGAAACGCACCTCGGTGCATCCTTCGAATGCAGTGGTCAAAGCTACAGTTATTTGACGCTCGACACGTTACGACGGCTAAAGGGATGTTTGAGGCAATCTGCAACCATATCAGATATGGGACAAACAATGGAAATATCAGAACGTGTATCACAGTGTTTCCCAAGAGAACGGATCCTAAGAAAGACTACAGAGTGTGGAACTCTCAGCTCATCCGCTACGCAGGATATCGCCAGCCTGATGGACGCGTGATTGGCGACCCGGCCAACTGTGAACTGACCGAGGTGTGTATAAAACTGGGATGGAAGCCTAAGGGAGGAATGTTTGATATTTTACCGCTGGTGCTGTCGGCAGGAGGCCACGACCCAGAGATGTTTGAAATCCCCAAAGATATCATTGTGGAAGTACCCATCAAACATCCAAATTATCCGCAGATAGCTGAACTAGGGTACAAATGGTACGCCCTGCCTGCCGTATCCGGGATGTTGTTAGACTGTGGAGGTATCGAGTTTCCAGCCAGTCCTTTCAACGGATGGTACATGGGCACAGAGATAGCTGCGAGAGATTTGTGTGACGTTGCTCGATACAACGTCATAGAGCCTGTAGCTAAAAAACTGGGTCTTGATACACGATCAACATCAACTCTGTGGAAAGATCAAGCCTTCCTAGAAATGAACGTTGCTGTGTTGCATAGCTATCAGACAGCAGGAGTGAGTATTACAGACCACCACGCCGCGTCTGACTCGTTCATCAAACACCTGGAAAATGAACAGCGCCTGCGCGGCGGGTGCCCAGCAGACTGGGTATGGGTCGTTCCACCAATCAGCGGGAGTCTTACGCAAGTCTTTCATCAGGAAATGCTGATGTACATTCTGAAACCATCTTATGAATACCAGGAAGACGCTTGGAAAACACACATCTGGGAGAAGCCGCGGAAAGAATTCAGCAAATCTGCGAGCAAAAAAAATAAAAAATATAGTTTCAGACAAGCAGCCAAAGCTGTTAGTTTCAGTACAAAGATGATGAAAATTGCTCTTGGAAAACGAGTGAAGTGTCTCGTGTTGTACGCCACAGAAACTGGCAAATCAGAAAACTTTGCTAAAACCACCTGTGATATATTCAAACACGCCTTTGACGCTAAGGTTATGTGCATGGACGAATATGACACCAATCGACTTGAAAACGAGGCTCTGGTTCTTATCGTCACCAGTACATTTGGCAATGGCGACTCACCAGAAAACGGAGAGGCCTTTGCTAAAGATGTGGGGTCGTTAAGAAATGGAGGAGAATCAATGAAAGAAAAACAAGTGAAAACTGGTAGAAGCAACAGTAATGAAAAAAGCGACTCAACGAACAAAAGGCTTTGTTTAGGAAACGTCAGGTTCGTTTAAATATTGTCGTCAGGGTAGAAAAAAAATCCAGATAACACTAAATCTGCGATCCTTTGTACACTTAAAGAGTACCATTTGGCAGTAGAAATGGTCCAAATAATTATTTTAACATACAAGTTATTATTTTGATTAGCCCGAGCGAACTATTATTGTTAATAACAAAATAAGACAATAAAGTAATGGTTGCAAAACGTTAGAGCACCGCCTTTTACCCCGTGATATCTTGATTCATGACGTCATCGTGACGTCATAATGACGTCATAATGCACTTGGCAGCCACATGGATACTGGTCTTTTTTTCTAAGAAAGAAAAGATAATTTATCTGCTCTGTAACCGATGACGTCACAACTGCAGAAAATATGATGTCCACCTATTTATTTGTTTTAAATCTGTACTCTTGTCATTGTATTTCATAATTAATTAAGACTGGAAGGAATCAAAATGTGAAAGTATACTCAATATATTTTGACTGTTTCTTTGTATTACCAAAGACGCACTTTATTGTGATAATTATTTCGTTGCAAAGATATGGCTGACTTATGGACTCTGTCCTTTTCTGTCAAACTGATAAAAAAAAACTTGAAGATTCATAAATTTCAGTGATGTAGGTCTTCATAGCAAGATACGGCTTGTTTGCTAATCTCGTAGAAAGTGTGTGTGTTTTATTACAGATATTCCGTGTTTGCTCTGGGATCGCGAGCCTATCCCAACTTCTGTGCGTTTGGACATTACCTGGACAACGTGTTCCACGAACTCGGAGCAGAGAGAATCGTGTCTGTGGGAGAAGGAGATGAACTGTATGGACAAGAAGAATCTTTCGAAACGTGGGCTCAGGAGGTGTTCAAGGGTGCTTGTGATACGTTTTCAGTGGGTGGCGGTGTCGACATGTCGAAGGCCACTGCAGTTGTCTCTAAAAAAAGCATCAGATGGTCTGCAGAAAAATTCAGAATTAAACCTCTGGAAAAGGAAGTGGAACTGGATTTATGCACAGCTTTGTCTAAACTGCACTCCAAATCTATACGTCCATGCAAACTACTTGAGAGAATCCAGCTGCAGAGTTCTCAATCTCCTCGACAAACCATCCTGGTAAAACTGGACAACGGTGGAGCAGTGGAACTGCTCTTTCAGCCGGGCGACCATCTTGGAATATTCCCAGCTAATCCGCCAGACTTGGTTGAAGGTTTGCTGTCACGTCTACACAGAGCTCCTGCTCCAGACCAGGTGTTCCAGGTGGAAATAATGGAAGACAAGACAACTTCAGGCAGCGCGAATGGCTGGACGTTGTATGAGAAAATGCCGAAGTGCAGCTTGCGAACAGCACTGACGCATTTCTTGGACTTATCGATGACACCAGCGCAGTCATTTCTGAAACTCCTGACCACCCAAGTTTCAAACAACAAAGATCGAGAACGCCTGGAGCAGCTAGCTGCAAAAGCAGATGTTTATGAAGAATGGAAATCTAACGTGAGTCCCAACGTGCTGGAAGTATTCAACGAGTTTCCGTCACTCAAAGTTCCACCGTCTCTGATCATCACTCAACTACCACTACTGCAACAGCGTTTCTACAGCATCAGCTCGTCTCCGCTGACTGCACCAGATCAGATCCACGCCACCGTAGCTGTGGTTCGCTACAGAACACAAGATGGCCCAGTACGTGAAGGTGTTTGTTCTGGCTGGCTGAACCGATGCAACATTGGAGAAACAATTCCCTGTACCCTGAGAACAGCTCCTAATTTCCGAATGCCCCAAGACATCACAACACCGATGTTGATTGTCTGTGCAGGAACCGGTATGGCGCCGTTCAGGAGTTTTTGGCAGCACAGAAAAATTAACAAAGAGATGCACACGCAGACTAAAGACCAAAAGAACAAAACATGGGGTGATATGAAGCTGTATTTCGGATGTCGCAAACCTACAGAAGATTTCATCTACGAGAAAGAATTGCAACAAATGAAAGCAGAAGGAGTTCTGACAGACTACTACGTGGCCTTCTCAAGACAGCAAGGACAACCTAAAGAGTACGTTCAGGGTCTGCTGATGAAGAATGCTGGAGATATTTACAACACGATGGTGAAGGAAGGTGGACATTTCTACATCTGCGGAAACGTCACCATGGCGACCGATGTCACTGTCGCTTTGGAAAATATTCTGCAGATGAAAGGTGGAATGTCATCAGAAAATGCTAAGAATTACATCATTAAACTTCAGGACAGTAATCGTCTACATAAAGACATCTTTGGTGTTAACATTTCGAAAAATTTCCGAGAAGCTGAGCGCCCCCTTGACGAAAGAATTGCAAACGCGAGGAGCCAGGATCAGACCAGCACAGCTAACAATGAACAGCAGATTTCTCGAGGAGAAGCAGTAGGGGCTGCAGGTGGACGTGGAAATCAAACTACGACATCAGCAACGTGCACCATTTTATAAGTGGATTCTGCGACACTGGCAAAATTACACTGTGATAACTCAAACTGACAGAAAACAACAACATCTATAAAAACTAGAAAATAGGACAGGACTTACTTCATACGTTTTCTTCACTGTAACTAATATACATTGTTGTTAGCGATGAATTCAAACTGCTGTTGCAATATTTAAAGTTCTTTTCTTTTCTCTCAAATAGACATTGTTGAAATATTTATAAAATGCGTGTACAGTCATTTTCAAAACGTTGTGACATAAGTAAATAACAAAAAGTTTTTGTTACTTTATCTGCCTTTCAAAAGCTTTATTTTTTTTTTTCTTTGAAATAAATGTTTAAATCCCTAAATATACAGTAAAGAATACTTAAATATTTAAATACATACACTTTTGAATTTTAATAGAATATTGTGTGGATTATTTATTAACACATC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00258	Flavodoxin_1	Flavodoxin	Domain	Interproscan
PF02898	NO_synthase	Nitric oxide synthase, oxygenase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001094	Domain	Flavodoxin-like	Interproscan
IPR004030	Domain	Nitric oxide synthase, N-terminal	Interproscan
IPR008254	Domain	Flavodoxin/nitric oxide synthase	Interproscan
IPR029039	Homologous_superfamily	Flavoprotein-like superfamily	Interproscan
IPR036119	Homologous_superfamily	Nitric oxide synthase, N-terminal domain superfamily	Interproscan
IPR044940	Homologous_superfamily	Nitric oxide synthase, domain 2 superfamily	Interproscan
IPR044943	Homologous_superfamily	Nitric oxide synthase, domain 1 superfamily	Interproscan
IPR044944	Homologous_superfamily	Nitric oxide synthase, domain 3 superfamily	Interproscan
IPR050607	Family	Nitric Oxide Synthase (NOS)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43410	NITRIC OXIDE SYNTHASE OXYGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004517	Molecular Function	nitric-oxide synthase activity	Interproscan
GO:0006809	Biological Process	nitric oxide biosynthetic process	Interproscan
GO:0010181	Molecular Function	FMN binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf69_14.11 global RNA-seq network