| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf67_1.41 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 | chr10 | 7781299 | 7792870 | + |
| CDS | |||||
| CsqKR_Scaf67_1.41 | |||||
| Transcript |
| CsqKR_Scaf67_1.41 |
| Protein |
| CsqKR_Scaf67_1.41 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00644 | PARP | Poly(ADP-ribose) polymerase catalytic domain | Family | Interproscan |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF13857 | Ank_5 | Ankyrin repeats (many copies) | Repeat | Interproscan |
| PF18346 | SH3_15 | Mind bomb SH3 repeat domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002110 | Repeat | Ankyrin repeat | Interproscan |
| IPR012317 | Domain | Poly(ADP-ribose) polymerase, catalytic domain | Interproscan |
| IPR036770 | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR040847 | Domain | Mind bomb, SH3 repeat domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24202 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003950 | Molecular Function | NAD+-protein poly-ADP-ribosyltransferase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf67_1.41 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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