Detailed information of CsqKR_Scaf64_9.24 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf64_9.24POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATEDchr81127027011277847-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan
IPR006532FamilyPoly-U binding splicing factor, PUF60-likeInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR034209DomainPUF60, RNA recognition motif 1Interproscan
IPR034211DomainPUF60, RNA recognition motif 2Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR051974FamilyPoly(U)-binding-splicing regulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47330POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000380Biological Processalternative mRNA splicing, via spliceosomeInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006376Biological ProcessmRNA splice site recognitionInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf64_9.24 global RNA-seq network
TOP