Gene detail

Detailed information of CsqKR_Scaf524_4.27 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf524_4.27	UNCHARACTERIZED	chr1	30666539	30675939	+

Gene Structure

More details in Jbrowse Sequence

CDS

CsqKR_Scaf524_4.27

ATGGAAAAAAATAAGTTTGACACTGATGCCGGTTCCGACGACAAATCAGCTATGTACAGTGTGAATAATTCATCACCGAAGCCACAACAGCCCACCGAGGAAAATGGTTTGCTGATTACAGACAATCTTATCGAACTGAGTGAAAAAACGACGTTACAAACTGAATCATTGTCAATACAGAATATTAAGCCCGACAAGCTGACTGAACCAGAAATTGAAAGAAAATCTGGAACAGAAGCCAGGGCGAAAGTAAATTCAGTTTCTAGTACAAGCGACAGTTTATGGACAAGTGAAGCAAGTGTTTCTTACGATAAAAATATCAGTGAAGAAAAGAACGATATATCGAAATCACCGGCTTATTCGAATGACACGTCGCATTCTAACACAGAATCTAACAACAAAAAGACAGAATTTGAAATAACAGCTCATACAGAAAATTCAGATGCAAACAAAAATGATGATTTCAGCATTAGTCAAACCAGCTCTGCCCATGCAGTGAGAAGTGATGATTCTGATAATATTATTTCAAAATGTGCAGGAGACGATGAATCAAACAAAGTAACCAAAAACATTTTGGATCCTAACCAGAAAGAAAATACGTCTGTTTTAATTGTTGCTCCAGAGGAAATAAATCTAAATCCGAACAACAACAGCAATTGCAACATTTACAAAGCTGGACTTGATGAAAAAAATAACCAGGAAAATCATAATGGTATCATAGAATTAGCAGTAAACGATATTCCAAGTGTACAATTCTTTGAATCTCAACAGACAAATATTTTAACTGAATCTAATAAAGAAACTGTAAAAGAGAATCAAGGACAGAATACTACTTGGAGCAAAGAAAACTTAACTGCTGATCAAAGCAAAGACTTGTCTAATGTTTTAGACCCTGACAATAGTGATATTAATACAACTAATAAATCAGACAGTAATACCGAAAATACTGAAGAACATAACGATAAAACAAAAGATACTAAACTCCATTTAGATATGGGTAAATCTGAGAGCAAAGACATCATTACTACATTAAATACCACTCTAATGGCTGAAGCAGAAAATGCAGATATACGTGATCAAAAAGACATGCCAGAACTGAAGTCAGTGGATGAAGTGTCGTCGTCTGCGAAACAGGTGTCATCAGCGCTCGAAATCTCAAAGGTCGCTACAGATGGAAATTTGGAAAAAGACAATGATGAAAAACAAAAGAAAAATGAAAAAGAACAAGCTGATAATAAAGAACAAATCACACTTGTTGATAACAAAGAACAAACTTCTACAAAAAATATTATTAAAACAAACAAATCATCATCTGAAGGAAAACCAGTAGCAAGATCAAAGCCTCAAAGGGACAGAAAAACGAACACAGTTCGAGACGGAGCTTTTAGAACTACCGGCCGTAAATCTTCAACCCCTAGAAATATAAACACTAAAAGAGATGATCAAAAGACACTGGCTTCAAAAGACATGAGAAAAACAACCCCAGCTAGAAAAATTGGAATTGATCATTCTCGAGAAAAACTTGGACAGAATGCCGTAGTGAAAGACACAAAATTCCAGAAATCTTCATCCACTGATAAATCAACTCCTTTGACAGGTCGAATATCGGACGACTCAAAAAACAGAGAAACTGATGAAAAACAAGACTCCGAAAAGAAACCACTTTCAGAAAATAAGAATAAAGCAGAAGCAGAAATTCCTTCATCCACAAAAGAAAAGGACGCTGAGCAAAACAAATATGATATAAAGAAGAATAAAGATGAAAGTTCTCATCCTAACACTAGTCTTTCCGTTATTGATGAAAATGAAGAAATTAAAAAGCCTCAGAAAGTGAAGTGGAACGAAAAAGTTATCATCCAGACAAAGAATAATGAAAAGAAACAAGTACCTAACGGGAACGTTGTAACGAAAGAAAACCAAGAAAATGATAAACTACAAAAAGCTGAATCAGCTCTAGATGGCAAAGCGAACAATGTCATCGAAAAGAATCAAACTGTGGTGACAATCGAAGAAGGCAGTGCACACGAAAAAGACGGTGAAAAATTTAATCCAAAAGCTATTTTCGCTAAAGCGGTCTGGAACAAGGCTGGAAAAGATAAACCAGGGTCTATGGCTATGAATGGACCAACTAAGACACTGAGTAAGTCTTCCTTGGCAGTGCGAAGTGGTTCCACAGTTGAGGAAAAAGAGGAGAAATTATCAGTAGAATCACGCAGAGATTCCACAAAACTTTCCCTCGATTCCGTCTCCCACAAATCTATAGACTATCGGAATGCTACAACCATTATTAATCCCATTCCAGAAGAAAAACCTCGATCTCTTCTGAACAGCAATGATTCGTGGATCCGCTCGGCAATTCCTTATCAGCCATTAAGCTTGTCGATTCTCTGTTTGTTCCTAAATGTTATTTTACCTGGATCGGGAACTATAGTAAGCGGATTTTCAATTCTGTGCTGCGGGAAAACACGAGTCACCAGCAAAGATGACCACGTGCCTATTACGGTGTGTTTGAACATCTGGGTTGGAGTAGCTCAGTTCTTCACCATCACTTTCTGTCTTGTTGGATGGTTCTGGAGCATCGCCTGGGGAATCAAGATGATTATCCTTTCAGTTGAATATCGACGAGAACTAAAAGCAAAACGAGAAATGGAGTTACAAGCCATGGCTCTTAGTGCTTTTGGCTCCCCATCACGTGTACGTCAGTTATTCCATACATGA

Transcript

CsqKR_Scaf524_4.27

CGATCGATCATCTACTTACGTATAAAGAAATTTGATAAGTTAAATATGGATTGTTTAAAGTGTGGAACGTTTGTGTCGTGTGATGAAGCGGACGCCGTTGTGCGATATCATTGATCAAATTTGCTCCATGTGGAAAAAACCATCGATCGCACTATCGCCAATCTATATATGAAATGCTGTGAGTGATACGAGTTCCATTTGTGAATTTTCTTTTTTCACAATACGTTAGACTGTCATTGCTGGAATCAGAATTCACCATTGTCATGTCCACATTTTCCCCTGATACTTATTAATACGAACTTAAAATATTTATAAATGGAAAAAAATAAGTTTGACACTGATGCCGGTTCCGACGACAAATCAGCTATGTACAGTGTGAATAATTCATCACCGAAGCCACAACAGCCCACCGAGGAAAATGGTTTGCTGATTACAGACAATCTTATCGAACTGAGTGAAAAAACGACGTTACAAACTGAATCATTGTCAATACAGAATATTAAGCCCGACAAGCTGACTGAACCAGAAATTGAAAGAAAATCTGGAACAGAAGCCAGGGCGAAAGTAAATTCAGTTTCTAGTACAAGCGACAGTTTATGGACAAGTGAAGCAAGTGTTTCTTACGATAAAAATATCAGTGAAGAAAAGAACGATATATCGAAATCACCGGCTTATTCGAATGACACGTCGCATTCTAACACAGAATCTAACAACAAAAAGACAGAATTTGAAATAACAGCTCATACAGAAAATTCAGATGCAAACAAAAATGATGATTTCAGCATTAGTCAAACCAGCTCTGCCCATGCAGTGAGAAGTGATGATTCTGATAATATTATTTCAAAATGTGCAGGAGACGATGAATCAAACAAAGTAACCAAAAACATTTTGGATCCTAACCAGAAAGAAAATACGTCTGTTTTAATTGTTGCTCCAGAGGAAATAAATCTAAATCCGAACAACAACAGCAATTGCAACATTTACAAAGCTGGACTTGATGAAAAAAATAACCAGGAAAATCATAATGGTATCATAGAATTAGCAGTAAACGATATTCCAAGTGTACAATTCTTTGAATCTCAACAGACAAATATTTTAACTGAATCTAATAAAGAAACTGTAAAAGAGAATCAAGGACAGAATACTACTTGGAGCAAAGAAAACTTAACTGCTGATCAAAGCAAAGACTTGTCTAATGTTTTAGACCCTGACAATAGTGATATTAATACAACTAATAAATCAGACAGTAATACCGAAAATACTGAAGAACATAACGATAAAACAAAAGATACTAAACTCCATTTAGATATGGGTAAATCTGAGAGCAAAGACATCATTACTACATTAAATACCACTCTAATGGCTGAAGCAGAAAATGCAGATATACGTGATCAAAAAGACATGCCAGAACTGAAGTCAGTGGATGAAGTGTCGTCGTCTGCGAAACAGGTGTCATCAGCGCTCGAAATCTCAAAGGTCGCTACAGATGGAAATTTGGAAAAAGACAATGATGAAAAACAAAAGAAAAATGAAAAAGAACAAGCTGATAATAAAGAACAAATCACACTTGTTGATAACAAAGAACAAACTTCTACAAAAAATATTATTAAAACAAACAAATCATCATCTGAAGGAAAACCAGTAGCAAGATCAAAGCCTCAAAGGGACAGAAAAACGAACACAGTTCGAGACGGAGCTTTTAGAACTACCGGCCGTAAATCTTCAACCCCTAGAAATATAAACACTAAAAGAGATGATCAAAAGACACTGGCTTCAAAAGACATGAGAAAAACAACCCCAGCTAGAAAAATTGGAATTGATCATTCTCGAGAAAAACTTGGACAGAATGCCGTAGTGAAAGACACAAAATTCCAGAAATCTTCATCCACTGATAAATCAACTCCTTTGACAGGTCGAATATCGGACGACTCAAAAAACAGAGAAACTGATGAAAAACAAGACTCCGAAAAGAAACCACTTTCAGAAAATAAGAATAAAGCAGAAGCAGAAATTCCTTCATCCACAAAAGAAAAGGACGCTGAGCAAAACAAATATGATATAAAGAAGAATAAAGATGAAAGTTCTCATCCTAACACTAGTCTTTCCGTTATTGATGAAAATGAAGAAATTAAAAAGCCTCAGAAAGTGAAGTGGAACGAAAAAGTTATCATCCAGACAAAGAATAATGAAAAGAAACAAGTACCTAACGGGAACGTTGTAACGAAAGAAAACCAAGAAAATGATAAACTACAAAAAGCTGAATCAGCTCTAGATGGCAAAGCGAACAATGTCATCGAAAAGAATCAAACTGTGGTGACAATCGAAGAAGGCAGTGCACACGAAAAAGACGGTGAAAAATTTAATCCAAAAGCTATTTTCGCTAAAGCGGTCTGGAACAAGGCTGGAAAAGATAAACCAGGGTCTATGGCTATGAATGGACCAACTAAGACACTGAGTAAGTCTTCCTTGGCAGTGCGAAGTGGTTCCACAGTTGAGGAAAAAGAGGAGAAATTATCAGTAGAATCACGCAGAGATTCCACAAAACTTTCCCTCGATTCCGTCTCCCACAAATCTATAGACTATCGGAATGCTACAACCATTATTAATCCCATTCCAGAAGAAAAACCTCGATCTCTTCTGAACAGCAATGATTCGTGGATCCGCTCGGCAATTCCTTATCAGCCATTAAGCTTGTCGATTCTCTGTTTGTTCCTAAATGTTATTTTACCTGGATCGGGAACTATAGTAAGCGGATTTTCAATTCTGTGCTGCGGGAAAACACGAGTCACCAGCAAAGATGACCACGTGCCTATTACGGTGTGTTTGAACATCTGGGTTGGAGTAGCTCAGTTCTTCACCATCACTTTCTGTCTTGTTGGATGGTTCTGGAGCATCGCCTGGGGAATCAAGATGATTATCCTTTCAGTTGAATATCGACGAGAACTAAAAGCAAAACGAGAAATGGAGTTACAAGCCATGGCTCTTAGTGCTTTTGGCTCCCCATCACGTGTACGTCAGTTATTCCATACATGATGATGTTACACTGAATTCTTATAATTATTCAGATAGATTTCAAGAAATTTCTTGGTGCAGTTAAAAAATCCAGATCGTTTTGATAAAATTATCATTTGAGAAATCACTGAGTCTCTGTTACTGTTCAGAAAGCAGTATTAGAGATCTTTATAAATGAAATGTAGAAAAGGTCCTAATTTTTTAACTGCTGAGCAGTTTTTAATAAGCAGGCTAATATAAATTGGCAACTTCATAACTTTGTTAAAAGTTGTAAAAATTGTTTTTACTATTTAATTTTTTCTGTGAAGAAAAATAAATTATATATTACAATTTTTATGACTTCTCTTGTTTTTATGATTTAAAACGAAGGGGTGATGGTAAGAATAAAGAAAATTAATAATTATTTTGATTGTCAACTATTAATAGGGTCTCCGAAGACAAATATGTTTTCCTAAATTGACATAAGATATATATCATACAGATTATCATTAAACTCGGAACAAGTGTTATATCGATTGAACCGATTTTCTTTGTTGTTTTAATCAACACTACTTGCATTTAATAATAAAATTGTTTAATAAACAGCAACCACTGAAATTTTAGGCGAATACATGATACTGTAAATATTTAAAGTATGTTCTGAATAATCATCAAGCAGTTTTTAGGTAATTAATATCAGACATTGCAAACTACATTTTTTATTCAGTTCTCTTCCATTTCTCGATGCACTGACCTTTCAGGCTTATTTACTATTCACTTTTATTGAAAAGATGTTAACAGTTACAAAATATAGCAATTTGTAAAATCTATACGGAATGGCTTCACCTTTGTTTGTACTCGGACAGCCATCGCCAATAACGACCAACCTCTCAGTAAATAAAGGAAAACAAATCGATCCCCGAGATTTGACATTGATTTGCAAATAGTTTCCTTCCGACTGTTATTGTTAAACATTCTTACATTTTAAGCAACTTAAAATAATCTCTTTAATTACTGATTTATTGGGTAAAGTCATCCAGTAAAGCAGTAATTAAAAATAATGGAAATGACTTCAAAATACATATATGCCTTTAAATTTAAAAAAATATTTGTGATGTGCATTGTTATTAGCTTTATCTGAATTTGTGGTTGCTGCAACTTTTCTGTGTACATGACACTATTTCCATGAAAGCATTATGAAGAGACGATAAACTAACCCCCTCCAAAAATACCCAAAACACTTTTTATACATCGATTAAATGTAAATTGATTTTTCACAAGTGGTTTCCGCTTACCTGATCAAAATCAATGAAGCAAGTATTTTGTAACAGAAAAAACACAACTGCTGACAATTTGTTTTCAGAAATGCTTTGTGTAAACATTAATTTTCTTTTGAAATAATTGTCATTGTCAAACTTCTGAATTTGTTCAATATTTGTTGAAATTAGTAATTATGATAAAGTTTTAAATATATTCGTAATTTACCTATAACCAAAGACACAATAAGAAAAATTATCCTGTTGTTTGCACAAAAATAAATTAATCCATAAATGAAATATCAAATATCAAGACACAATAAAAGTACTGAACTTGAATTCATAGACATATTTTCAAGCTTGACCTGTATTTTCTCAAAAACCATTAATATTAAAATTCAGAATGAAGATTATAAAAACAGATTTCAAATTTTAATGGAGTTTTAATTGGAGTAAGGACATGATAAAAATAAATTAAAAACTGTTTATTTCTGTTTATTGTAAACAGTAATGAAAAATACATAGATAAACACAGGAATAAGAGGAAAAAAAAATACAGTGAGATTTGGAAGTTTATTAGAAACAACGGCCATCTACAGTGTAATCAAAATTTAGATTATTTCATTTTACAGAAATTAGATAAAATTACAAATAGAATTACAATGTTCACAACATACAACCTTTTTTTTTCTTTTTTCTTTTTTTTGGTCACTATTAAAAAGTAATTAAAAAAAAATAAATAAAAAATAAACAACAAAAAAGTATATCAGCTCTAAACTTTTAACAACATAACTGTACAGAATGTTATG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15795	Spec3	Ectodermal ciliogenesis protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026673	Family	SPEC3/Stum	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21676	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0019230	Biological Process	proprioception	Interproscan
GO:0042330	Biological Process	taxis	Interproscan
GO:0050954	Biological Process	sensory perception of mechanical stimulus	Interproscan
GO:0071683	Cellular Component	sensory dendrite	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf524_4.27 global RNA-seq network