Detailed information of CsqKR_Scaf490_5.11 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf490_5.11TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKEchr31830665818314288-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF01207DusDihydrouridine synthase (Dus)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR018517Conserved_sitetRNA-dihydrouridine synthase, conserved siteInterproscan
IPR035587DomainDUS-like, FMN-binding domainInterproscan
IPR044463DomainDUS2, double-stranded RNA binding domainInterproscan
IPR052582FamilytRNA-dihydrouridine synthase-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45936TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002943Biological ProcesstRNA dihydrouridine synthesisInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0017150Molecular FunctiontRNA dihydrouridine synthase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf490_5.11 global RNA-seq network
TOP