Detailed information of CsqKR_Scaf43_4.9 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf43_4.9HUNTINGTON DISEASE PROTEINchr8453693487786-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12372Htt_N-HEATHuntingtin, N-terminal HEATRepeatInterproscan
PF20925Htt_bridgeHuntingtin, bridgeRepeatInterproscan
PF20926Htt_N-HEAT_1Huntingtin, N-terminal HEAT 1RepeatInterproscan
PF20927Htt_C-HEATHuntingtin, C-terminal HEATRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000091FamilyHuntingtinInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR024613RepeatHuntingtin, N-terminal, HEAT repeats 2Interproscan
IPR028426FamilyHuntingtin familyInterproscan
IPR048411RepeatHuntingtin, N-terminal, HEAT repeats 1Interproscan
IPR048412RepeatHuntingtin, bridgeInterproscan
IPR048413RepeatHuntingtin, C-terminal HEAT repeatsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10170HUNTINGTON DISEASE PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf43_4.9 global RNA-seq network
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