| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf41_36.3 | BEIGE/BEACH-RELATED | chr6 | 18426289 | 18486250 | + |
| CDS | |||||
| CsqKR_Scaf41_36.3 | |||||
| Transcript |
| CsqKR_Scaf41_36.3 |
| Protein |
| CsqKR_Scaf41_36.3 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02138 | Beach | Beige/BEACH domain | Family | Interproscan |
| PF06469 | DUF1088 | Neurobeachin-like, DUF1088 | Domain | Interproscan |
| PF13385 | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF14844 | PH_BEACH | PH domain associated with Beige/BEACH | Domain | Interproscan |
| PF15787 | DUF4704 | Neurobeachin/BDCP, DUF4704 alpha solenoid region | Repeat | Interproscan |
| PF20425 | Neurobeachin | Neurobeachin alpha solenoid region | Repeat | Interproscan |
| PF20426 | NBCH_WD40 | Neurobeachin beta propeller domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000409 | Domain | BEACH domain | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR010508 | Domain | Neurobeachin-like, DUF1088 | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR023362 | Domain | PH-BEACH domain | Interproscan |
| IPR031570 | Domain | Neurobeachin/BDCP, DUF4704 | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR036372 | Homologous_superfamily | BEACH domain superfamily | Interproscan |
| IPR046851 | Domain | Neurobeachin, beta-propeller domain | Interproscan |
| IPR046852 | Domain | Neurobeachin, alpha-solenoid region | Interproscan |
| IPR050865 | Family | BEACH Domain-Containing | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13743 | BEIGE/BEACH-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0008104 | Biological Process | protein localization | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0019901 | Molecular Function | protein kinase binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf41_36.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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