Detailed information of CsqKR_Scaf41_18.27 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf41_18.27GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1chr61667001716686460-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyMYB
Ubiquitin FamilyUBD|Other|Jab_MPN
Ubiquitin FamilyDUB|JAMM|JAMM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF01398JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan
PF04433SWIRMSWIRM domainDomainInterproscan
PF10250O-FucTGDP-fucose protein O-fucosyltransferaseFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000555DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR007526DomainSWIRM domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017884DomainSANT domainInterproscan
IPR017930DomainMyb domainInterproscan
IPR019378FamilyGDP-fucose protein O-fucosyltransferaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR037518DomainMPN domainInterproscan
IPR039922FamilyGDP-fucose protein O-fucosyltransferase 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR21420GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0008233Molecular Functionpeptidase activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008593Biological Processregulation of Notch signaling pathwayInterproscan
GO:0036066Biological Processprotein O-linked fucosylationInterproscan
GO:0046922Molecular Functionpeptide-O-fucosyltransferase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf41_18.27 global RNA-seq network
TOP