| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf40_21.18 | E3 UBIQUITIN-PROTEIN LIGASE UBR5 | chr14 | 5504873 | 5533705 | - |
| CDS | |||||
| CsqKR_Scaf40_21.18 | |||||
| Transcript |
| CsqKR_Scaf40_21.18 |
| Protein |
| CsqKR_Scaf40_21.18 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|UBR-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003126 | Domain | Zinc finger, UBR-type | Interproscan |
| IPR009091 | Homologous_superfamily | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | Interproscan |
| IPR047503 | Domain | E3 ubiquitin-protein ligase UBR5, UBR-box | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46276 | E3 UBIQUITIN-PROTEIN LIGASE UBR5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0034450 | Molecular Function | ubiquitin-ubiquitin ligase activity | Interproscan |
| GO:0090263 | Biological Process | positive regulation of canonical Wnt signaling pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf40_21.18 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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