| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf394_2.7 | 5'->3' EXORIBONUCLEASE | chr10 | 1370486 | 1405213 | + |
| CDS | |||||
| CsqKR_Scaf394_2.7 | |||||
| Transcript |
| CsqKR_Scaf394_2.7 |
| Protein |
| CsqKR_Scaf394_2.7 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17846 | XRN_M | Xrn1 helical domain | Domain | Interproscan |
| PF18129 | SH3_12 | Xrn1 SH3-like domain | Domain | Interproscan |
| PF18332 | XRN1_D1 | Exoribonuclease Xrn1 D1 domain | Domain | Interproscan |
| PF18334 | XRN1_D2_D3 | Exoribonuclease Xrn1 D2/D3 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027073 | Family | 5'-3' exoribonuclease | Interproscan |
| IPR040992 | Domain | 5'-3' exoribonuclease 1, D1 domain | Interproscan |
| IPR041106 | Domain | Exoribonuclease Xrn1, D2/D3 domain | Interproscan |
| IPR041385 | Domain | 5'-3' exoribonuclease 1, SH3-like domain | Interproscan |
| IPR041412 | Domain | Xrn1, helical domain | Interproscan |
| IPR047007 | Homologous_superfamily | 5'-3' exoribonuclease 1, D1 domain superfamily | Interproscan |
| IPR047008 | Homologous_superfamily | 5'-3' exoribonuclease 1, SH3-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12341 | 5'->3' EXORIBONUCLEASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| - | - | - | - |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf394_2.7 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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