| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf32_1.24 | TRANSMEMBRANE PROTEIN 2-RELATED | chr3 | 13753766 | 13779452 | + |
| CDS | |||||
| CsqKR_Scaf32_1.24 | |||||
| Transcript |
| CsqKR_Scaf32_1.24 |
| Protein |
| CsqKR_Scaf32_1.24 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00059 | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| PF01822 | WSC | WSC domain | Domain | Interproscan |
| PF10162 | G8 | G8 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001304 | Domain | C-type lectin-like | Interproscan |
| IPR002889 | Domain | Carbohydrate-binding WSC | Interproscan |
| IPR006626 | Repeat | Parallel beta-helix repeat | Interproscan |
| IPR011050 | Homologous_superfamily | Pectin lyase fold/virulence factor | Interproscan |
| IPR012334 | Homologous_superfamily | Pectin lyase fold | Interproscan |
| IPR016186 | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR018378 | Conserved_site | C-type lectin, conserved site | Interproscan |
| IPR019316 | Domain | G8 domain | Interproscan |
| IPR052252 | Family | Hyaluronic acid metabolism regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15535 | TRANSMEMBRANE PROTEIN 2-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| - | - | - | - |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf32_1.24 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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