Gene detail

Detailed information of CsqKR_Scaf314_0.16 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf314_0.16	METHYLTRANSFERASE N6AMT1	chr2	9984211	9988624	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf314_0.16

CCGGCATTTTAAAAATATATACATATATTTTATTATTATTATTATTTTTAACTATAGAACATTTAAAATAAGTGTAAGACGGACTTGGGTTGATATAGTAAATTAATCATACTCCATACGCTTTGATCATAAAAAAAAAAACATCATAAGAGATGAAATCTAGTAAATAAAAAATTATGCGGTTCATTTCCTAATTTATTGGCTAAAAGAACTGTTATATTGTTGTTGTTGTTATTGTTATTATTAATTTTCAAGTCCATGCTTTTACCGTTATAAGTGGTTTATATAATAGTTTCGAAAATGTAGTTCACTGTTGAAAAGAGAGCTCTGTGACTTCCAGCTGTGGATCTCTCAAAAGCAATGGAGAAATGTATAACGGAACAAGAGACGATAACTCTGAGAGAGGTTATAAATAAAACTGTTAATTGGAATTAACAGCAGAAACGGTCATTACAGTGTTTTAGAATCATAATCGTTAACAATGGATGTCGATTTTTCCACTCCTGTACTTTCTCACCTGACACAGAACGACTATGAACATGTATACGAACCTGCAGAAGATTCTTTTCTTGTTCTTGATGCTCTACAACAGCAGTACAAATTTCTTAAACAACTGAAGCCAACTATTTGTTTAGAAGTAGGATGTGGATCAGCTGTTTGTATCTCATTTCTGGCTCGAATTTTGGGACCGTCTTCATTTTATTTAGGTACTGATATTAATAAATGTGCTACTGATGTTGCTATGGAAACTGCAAGAAGAAATGGTGTTTGTATTCAGCCGATCTTAACAGATCTAGTTAGTTGCCTGGAGACAAGACTGAAGCATTGTGTAGATGTCCTCATTTTCAACCCACCTTATGTTGTTACACCAAATGATGAGGTAGGAAATCAAGATATTACGGCATCCTGGGCTGGAGGAGTGAGGGGGAGACAAGTCATGGATCGGCTCTTTCCAGTGGTATCAAAATTATTATCTCCCACTGGAGTTTTCTACTTGGTCATTATTAAAGAAAATGATCAAGATGACATTGAAGCTATATTGACAAAACAAGGTTTAAAAATGGAGGTAATTAACAGCAGACAGTCAGGTCTAGAATTTTTGTCAGTTCTCAAATTTACCCAAAACGTCAGATGACCTAGAAATGTCACAGAATTTATTCCAATGTTTTACAGACTCCACATCAGTATCACAGTGTTTAAAATAACATCATAAAGTGGCAGACCAGTGAACATCCTGAATCCAAATATATATATATATATATATATAATCAGTGGTGCAAAGTTACTTCAGGATGCAGGAGAAATATCAAACTTGCAGTGCCTGTACACCTTATGATGTTTTAATAAGGTGTGAAAAGTGATCTCATTTCTAACCTACTGTTGATGAAAATGTAAAAAAAACCAATGTTCTTAAACTACTTGAAAAATTTAAAACAAAATGGTCAGAGAAGATTTTGTGAGTTTTGCATAGATATAAACACATTTTGTGTGTGTGTGTGTGTGTATGAAGTATGAGTGTGTATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAAGAGTGTGTGTGTGAGTGTCAAACATGAACTTTGTTAATTATTATCTGTATTATTTGTCTTGATTTTGATTTTTGTAGTTGAATAAACAGATAAATATGTACATTTTACTAATTAAAAATGACTTGAGAAGTGAAAATTTTATGATCATCAAAAATATTTTTGAAATGTAGCCAAACTGTTTATTTTAATTTAGTAAAAACTTTTAAAACTGTAAACTGTGTTTTGTCTACCATTGACAACTTATAAAACTGTTCTTGCTATTTCCATTGAAGAGTTTCTAAAAATACATGTGTCATATGTTATAAGTTTTTAGATATGTGCTGCTGCTGTTGGTGTTGTTAATGTTAGCCAGAATTAGTGAACATGATATCAGGATTGTGTGCATGGGTCAAAAAAGACTGAGCAATCTCACTGAAATAACCATCAGACATGGACTTCTGTATCAAATGTCTGTTTCCATGGTAACCAAAGGGTTTCCTTATTCTAAATCTAGAAAAAGTCATTTTGTTTTGTTATCTTTACATTTAAAATTGATGTTTTCATGATGTATTACAGTTAGTAAAGTCAATATTCC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR004557	Family	Eukaryotic/archaeal PrmC-related	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR052190	Family	Eukaryotic/Archaeal PrmC-Related Methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45875	METHYLTRANSFERASE N6AMT1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0008276	Molecular Function	protein methyltransferase activity	Interproscan
GO:0008757	Molecular Function	S-adenosylmethionine-dependent methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan
GO:0035657	Cellular Component	eRF1 methyltransferase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf314_0.16 global RNA-seq network