| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf300_0.35 | RING ZINC FINGER PROTEIN | chr8 | 7740533 | 7744425 | - |
| CDS | |||||
| CsqKR_Scaf300_0.35 | |||||
| Transcript |
| CsqKR_Scaf300_0.35 |
| Protein |
| CsqKR_Scaf300_0.35 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13705 | TRC8_N | TRC8 N-terminal domain | Domain | Interproscan |
| PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR025754 | Domain | TRC8-like, N-terminal domain | Interproscan |
| IPR050731 | Family | HRD1 family E3 ubiquitin-protein ligases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22763 | RING ZINC FINGER PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005783 | Cellular Component | endoplasmic reticulum | Interproscan |
| GO:0012505 | Cellular Component | endomembrane system | Interproscan |
| GO:0036503 | Biological Process | ERAD pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf300_0.35 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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