Detailed information of CsqKR_Scaf289_3.32 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf289_3.32EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM Cchr11831824870002-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168C2C2 domainDomainInterproscan
PF136402OG-FeII_Oxy_32OG-Fe(II) oxygenase superfamilyDomainInterproscan
PF17047SMP_LBDSynaptotagmin-like mitochondrial-lipid-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000008DomainC2 domainInterproscan
IPR005123DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR006620DomainProlyl 4-hydroxylase, alpha subunitInterproscan
IPR031468DomainSynaptotagmin-like mitochondrial-lipid-binding domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR037749DomainExtended synaptotagmin, C2B domainInterproscan
IPR039010DomainSynaptotagmin, SMP domainInterproscan
IPR044862DomainProlyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domainInterproscan
IPR051634FamilyExtended SynaptotagminInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45761EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM CInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0006869Biological Processlipid transportInterproscan
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0008429Molecular Functionphosphatidylethanolamine bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0031210Molecular Functionphosphatidylcholine bindingInterproscan
GO:0031227Cellular Componentobsolete intrinsic component of endoplasmic reticulum membraneInterproscan
GO:0031234Cellular Componentextrinsic component of cytoplasmic side of plasma membraneInterproscan
GO:0031418Molecular FunctionL-ascorbic acid bindingInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0061817Biological Processendoplasmic reticulum-plasma membrane tetheringInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for CsqKR_Scaf289_3.32 global RNA-seq network
TOP