Detailed information of CsqKR_Scaf268_6.13 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf268_6.13HECT DOMAIN UBIQUITIN-PROTEIN LIGASEchr73241103632458491+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT
Ubiquitin FamilyUBD|Alpha-Helix|UBA
Ubiquitin FamilyUBD|Alpha-Helix|UBM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00627UBAUBA/TS-N domainDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF02825WWEWWE domainFamilyInterproscan
PF06012DUF908Domain of Unknown Function (DUF908)FamilyInterproscan
PF06025DUF913Domain of Unknown Function (DUF913)FamilyInterproscan
PF14377UBMUbiquitin binding regionMotifInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000569DomainHECT domainInterproscan
IPR004170DomainWWE domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR010309DomainE3 ubiquitin ligase, domain of unknown function DUF908Interproscan
IPR010314DomainE3 ubiquitin ligase, domain of unknown function DUF913Interproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR018123DomainWWE domain, subgroupInterproscan
IPR025527Conserved_siteHUWE1/REV1, ubiquitin-binding motifInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan
IPR041918DomainHUWE1, UBA domainInterproscan
IPR050409FamilyE3 ubiquitin-protein ligaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf268_6.13 global RNA-seq network
TOP