Gene detail

Detailed information of CsqKR_Scaf25_14.17 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf25_14.17	GLUTAMATE CYSTEINE LIGASE REGULATORY SUBUNIT	chr8	13100040	13108876	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf25_14.17

GTTTTAATGTAAACACCGAAAGGAGTATTACTGACTGCAGCAAGATTTAACACACCCGATCTTGATAGCTGATACGCCTCTCCACTAAAGTATACAAAGCTACGCATTATTTCAGCAGATAATCTGTCTAGTGCACCTTGGAGAGCAAAAACAAAAAAAATGGGAGACGTTATTCCAGTTTTTCCGAAAGCGGGGACGCTTATTGTACATAGCGGCAACATTGTCAATTGGAACAGACTAAAAAGAAAACCAACTCAAAGTTCCACAGAAGAGTTGAAAGAATGTGTTACTGAGTCACTGAATAAGTATTTGTTAAGGTCAGACAAAAAGGAACTGCAGTATGTGACAGAACTGGTTTGTGAGAATACAGATTTCAAAGAAACTTTGCTTGCTGATGAAAGGGGAGATCTGAAAGTAACAGCCAAATTATTTTTCTGTGTGGACCAGCCTGTTGAAGTAATTACTGAAACTGTTGAGAAAGAGTTGGACATTTCCTTCATTGAGAGGTTACTTTTGTCTTTCCCGGAAATAGAAGAGAGGATATCTGTCAATCAGATAAAACCCTATTGGGAAGTGAAGCCGTGTACAAATCAGGTTAATCTGGCCTCTTGCTGTGTGATGCCTGAGGATCTCACTGAATTTGCTAAAGAGAACGACATCCAGCTTCTTACTCACAGTGACCCTCCTGAAATAATGCCTGCATGCGTCCTTCAGCAAGCAATAAAATCATGTGCAACAGAAAAAGACTGTTTGGGCTGGATTCCGCAGTGGGCTCTGAGATATTCAGTTATTATCAAGTGCCGTGGAATAATCAAAGACAAAGGCTACATCTTCAAAGCTGTCAGAGATGTCAAGAAAAGATTATAAACATTTTGCATCTCAAGCTAGCCTATAGGGCATTTGAACTGATGTTGTATATAGAGTTTGTGATGTTTTTACACACATACACACACATGCATCCACACACAAACACAGACAATGTTTCATCAATAAAAATAACAAATTTGAAATTAAGCTATGCCTTGTCAACAGGAAGGAATTAAAAATTATATAAGAAAATATTAAAACTTTATAAAACAAATGTAAATTTTATAACTGTATTTTGACTTTTTCTTATTTCATTTTTTTAATGGAAATAATTGAATAACAAGGACTACTAAGATCAAATGATTTTATGTATTCCATTCATAATAAATGATTAAGACACATTTTTTGTTTCTCTAGTTGATAGTAATATATAACCAGTAACAGACAATTTCATGTATTTTAAGATTAAAGCTGTTAATTTGTGGTTTTTGTTAGTTTCAGTATCATAATAGGATGTGGATGATTATATATTGCTAAGAGCTTCACAAAGATCTATAACTTCTGGGCATTTTTCAGTAAAGAATCATTTCATTTAAATTATTTTTATGAATGGCTGAATTAATTATTGCTGATTAGTTTCAAAATTCTTTATTTCAATAAATTAAAACAAAACATAAACTAGGCATCGCTCAGTTTAAGCAGTTTTGATAATAAAAGTCAAATCTGTATTAACAACAGTGAAACTGAAAAAGTAAACAATTTATGACAAACTTTTCTTTTTTGCTGTATCTTTTTCTTTCTTTCTTTCTTTTTCTTTTTTTTTAAATTTTTTTATATATTTAATATTAAACCAGTTAAACCTTGTATCAGATACATACTATAAAAAAAATCTGTTTTAATTTATAATTTGTCTCTTGTTAAAACAGTTGTCATCTAGTCAAACCCTTGACCTATGAATATTAAAAACTACATGATTAGTCAGGGTAAATATTTAGTTAATGTCACAAGATATTCAGTAATATTTCATGTATGTCAGGTCAAAGGTTAAATTTGACAGTTGGAACAATAGATTTTCCACAATAACAATATGTATTTAAGCTCATACAGCTACATACATATGTTTGTATTTATGCCTACATTTATGCTTTTCATTCAGATAGTATTCTGAACATATATATGTATGTATGTATATATATATTTCTTTCTTTCTTTTTTTTTTTTTGTTACCAACCAACCAAATAATAATAAAATATTTTTTGAAAATAAGTCCTATAACATATGTATATTTTTAATTTATTTATTTTCTTTTTTAATTTTCTCTCCTTATTTATTTATTTATTTAATTTATTTTTGAGCCAAAGAATTTCTGAGTTTCTGTTAATTTCTGGGATTAGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR032963	Family	Glutamate--cysteine ligase regulatory subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13295	GLUTAMATE CYSTEINE LIGASE REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006750	Biological Process	glutathione biosynthetic process	Interproscan
GO:0017109	Cellular Component	glutamate-cysteine ligase complex	Interproscan
GO:0030234	Molecular Function	enzyme regulator activity	Interproscan
GO:0035226	Molecular Function	glutamate-cysteine ligase catalytic subunit binding	Interproscan
GO:0035229	Biological Process	positive regulation of glutamate-cysteine ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf25_14.17 global RNA-seq network