Gene detail

Detailed information of CsqKR_Scaf252_2.30 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf252_2.30	GUANYLYL CYCLASE	chr2	6409558	6436220	-

Gene Structure

More details in Jbrowse Sequence

CDS

CsqKR_Scaf252_2.30

ATGAGCTCAGATGAGATGCAGTCAAGGGAACATAACTCTACCAGTGACAACAGCAAACAAACAAGACTTCAGATTTCATTTGCCATATATGATGGTCAGATGGTTACCATCAAACTACTGGTGGAATCTACGGTGACAATAACCAAGGAGTTTGTCATGGAAATCAATGCAATACGAATGCTCACTCATCCTAATATAAATCTTCTGATTGGAGGAGTGCCAGAAATCAGGAAGTTTTCACTGGTTTGGAGTTATGCGTCTCGGGGAAGTCTGCATGACATTCTGGCCAATGAAACGATAAAACTCGACTGGATCTTCAAAGTATCTTTTGCATCTGACATCGCAAAGGGTATGATATATCTGCACAATTCTCTAGTGAAAACTCATGGCTCTTTGAAATCAACCAATGTGATGATAGACAGTCACTGGCTTTGTAAGATCTCTGAAATATCAATGACACAAAATGGTTACAAGAATGAAGGACAGTCAGTGAAGTTTAAACAGCTATGGTTGGCTCCAGAACTACTTCGAAGTCAGATCCACAGTGTGAGAGGGACCAAGAAAGCTGATGTCTACGCCTACTCCATCATCTTGCAGGAGATTGTAGCTAGAACCTGGCCATATGGAAATTTGGTAACCGGTGCTGATGATAATGAAGCTGTTGCAGAAATTATCCAACGGGTCAAGAACGGAGAAATTCCTCCATGTCGTCCTTCCATTCCTTCTGAGCTTATTGAGGAACCTCTGCTGGCTGAGATTATGAGAATCTGCTGGGACGAAATTCCAGGAAGCAGACCAGTGTTTGAAGCAGTTCTCGTCCTGCTAAAGAAACTCAACTTGGGCAAGAGCACAAACATTGTTGATCAGATGATCCACATGATGTCAAAATACTCTGACCAGCTTGAAGAGATGGTTGAAGAAAGAACTCTGAAGTTGAACGAAGAGAAGAAAAAAACCGAAGACGTCCTTTCCTGTCTTCTTCCAAAGTGTATTTTGAACATTCACCCAGGTAAATACAGATCAATTTTGTACAATCCCCAGGTGATCACTCTTCTGAACAGCCTCTACACACTGTTTGATGACATCATCAACTCCTTTGGCGTCTACAAGGTTGAGACTATAGGTGATGCCTACATGGTGGTCAGTGGTCTGCCTATATGTAACGGAATACAACACGCTGGTGAGATTTGTACAATGGCCCTCAAGTTTCTCAGCTCAGTGGGAAGCTTCAAGATTCCTCACAGAACCAACAAACAGTTGCGGCTACGCATTGGAGTCCACAGTGATACTGACGTCAACGTTACAAACACGACGACACCAGATCCTCGTTTAGCTGAATGTGTGCTGACGTACTCAAATGGAACGTGCAAAAACTACTTTCGTGACTTGCTTGAGAAGGTCGTCGACCGAACTCGAAATACAACACTGGATGACAGAACAAATATAACTCTAGAGGTGTACGTTGAAAGTATTTCCTGGCTGGTGGAAAGTTCAGAATCTTTAATTCAGTCGACGGAGATCGTTAAAAAATCACAAGAAAACGCTGGCCTTATTCTTGGTGCTATGGAAGACATGACGCTCGCCACAAATCTGTCTGAAGTCGATCAAGATTTCTCAGCTTTAAGTGTAAGAATTAGATCCGAGGCAGGTACTGAAGAAGATGTTTTGACTGTCAGCTTTGTGACTGGGAATTATACAGATCAGATTCATCTGAATCCAAGTGTGTTTGACGATACTACAGGACGAGCTTCTTTTATTCTGTACAAGAACATGCATCAGATGATGTCAAAAAAGACGGTGAAACAGGAAGAGGCCGAAATAGCGAGCAGAATTTTGTCTGTCAGCGTGCAAATAAACGGAACAAGAAGAGCGAAAATAAAGAAGAATAACTCCGTATACTTCACAGTGCGAAATGTTCTTACCAGAGACAGAACAGATGAAAAATACAGACTGTGTATGTTCTGGAACGAAGACGTCAACGCCTGGTCTGATGACGGATGTCGCACCGACAACAACAACGACAGCTACACGAGCTGTGAATGCGACCATCTGACTAGCTTCGCTGTGCTTGTCTTGTATTTTGGAAATGATACGGTTAATAATTAG

Transcript

CsqKR_Scaf252_2.30

ATGGAAGCCGGACACACATTTGATTTCATTATCAGGGACACAAAGTGTGACCGAGGAACGGGACTGTTTGAGTTTGTGGAGATGGTCACGCACAAGATGGTGAACTCTAGCACAGCCATTCATGCAGTGATAGGACCATCATGTGATAATGTGTGCCAGTCAGTTGGTTTACTAGCCAGTAGATGGCGCATACCTGTCTTCAGTTTTGGTTGCTGGAGCGATGAACTGACCAATCGGAAAGACTTTCCCACATTAGTGCGTACAACAGGAAGTTTCAATGAGATTGGTGTCTTCTTCAGAAGTATTACCAAAACCTATCACTGGAATCGAATCACCTTGGTAACTGGTCTCCAATCAGCATGGATTAAGGCAGTGGCAGCCTTCACAGTGGATTTTATGAATGTAGGTATCATCACCCGGCGAATGTTACTTGTCACGTCAAGACTTGATACACTTTTGTTAGAAGAAGCTAAACACACCAGAGTCTTCATGCTGTGCGCCTATGGAGAAGATATCATCAAGTTCATGCTGGCAGCTTACAAACACAAACTGATGAATGGTGAATACGCCTTTGTAGCTTTGGACTATGCAAATATGGCAAAAAGAATTCCTGACTCTTACAATTCAACCATTCCTTTTGCTGAGGTCTTTGGAGGTATGTTAGACATTACTGTGGATGTCCGTCCAGACAGAGCAGAATTTGAAGATTTTATTAAAGATGTTGACAGTTTTAAAGGTTCCAGCCTGCCACATTATGAAGTAAATTATATAACTGTGATGGACAGAGAGGATGGATGGATGGATGGATGGATGCCTGGATGGATGGATGGACAGATGGATGCTTGGATGGATGGATACTTGGCTGGATGGATGCTTGGATGCTGGGTGGATGGATGGATGCTTGGGTGGATGGATGGATGGATGGATGGATGGGTTGGTGTAACAGGCCGACTAATTGTGGACAGAGATGGAAGCCGACATGTTGCATTCATGTTGCATAACATCCAGCATGACAAATATGTACCAGTAGCCAGAAGCAAAGCAGGTGGTGTTGGATTCGCATTCATTAAAGGTTCAGGGACTGTTATATGGCCAGGAGGGAAAACTGATGTCCCTCTAGATGAACCACAGTGTGGATGACAAAATGTTAAGAAGCTTCAGCTGGAAAGAAGTGACTGGAAAATAAACCCAGAATTGCTTCTGCCAGTGGCCAGTCATAGATCCTTACAAAGCAGTGGGAGTATGAGCTCAGATGAGATGCAGTCAAGGGAACATAACTCTACCAGTGACAACAGCAAACAAACAAGACTTCAGATTTCATTTGCCATATATGATGGTCAGATGGTTACCATCAAACTACTGGTGGAATCTACGGTGACAATAACCAAGGAGTTTGTCATGGAAATCAATGCAATACGAATGCTCACTCATCCTAATATAAATCTTCTGATTGGAGGAGTGCCAGAAATCAGGAAGTTTTCACTGGTTTGGAGTTATGCGTCTCGGGGAAGTCTGCATGACATTCTGGCCAATGAAACGATAAAACTCGACTGGATCTTCAAAGTATCTTTTGCATCTGACATCGCAAAGGGTATGATATATCTGCACAATTCTCTAGTGAAAACTCATGGCTCTTTGAAATCAACCAATGTGATGATAGACAGTCACTGGCTTTGTAAGATCTCTGAAATATCAATGACACAAAATGGTTACAAGAATGAAGGACAGTCAGTGAAGTTTAAACAGCTATGGTTGGCTCCAGAACTACTTCGAAGTCAGATCCACAGTGTGAGAGGGACCAAGAAAGCTGATGTCTACGCCTACTCCATCATCTTGCAGGAGATTGTAGCTAGAACCTGGCCATATGGAAATTTGGTAACCGGTGCTGATGATAATGAAGCTGTTGCAGAAATTATCCAACGGGTCAAGAACGGAGAAATTCCTCCATGTCGTCCTTCCATTCCTTCTGAGCTTATTGAGGAACCTCTGCTGGCTGAGATTATGAGAATCTGCTGGGACGAAATTCCAGGAAGCAGACCAGTGTTTGAAGCAGTTCTCGTCCTGCTAAAGAAACTCAACTTGGGCAAGAGCACAAACATTGTTGATCAGATGATCCACATGATGTCAAAATACTCTGACCAGCTTGAAGAGATGGTTGAAGAAAGAACTCTGAAGTTGAACGAAGAGAAGAAAAAAACCGAAGACGTCCTTTCCTGTCTTCTTCCAAAGTGTATTTTGAACATTCACCCAGGTAAATACAGATCAATTTTGTACAATCCCCAGGTGATCACTCTTCTGAACAGCCTCTACACACTGTTTGATGACATCATCAACTCCTTTGGCGTCTACAAGGTTGAGACTATAGGTGATGCCTACATGGTGGTCAGTGGTCTGCCTATATGTAACGGAATACAACACGCTGGTGAGATTTGTACAATGGCCCTCAAGTTTCTCAGCTCAGTGGGAAGCTTCAAGATTCCTCACAGAACCAACAAACAGTTGCGGCTACGCATTGGAGTCCACAGTGATACTGACGTCAACGTTACAAACACGACGACACCAGATCCTCGTTTAGCTGAATGTGTGCTGACGTACTCAAATGGAACGTGCAAAAACTACTTTCGTGACTTGCTTGAGAAGGTCGTCGACCGAACTCGAAATACAACACTGGATGACAGAACAAATATAACTCTAGAGGTGTACGTTGAAAGTATTTCCTGGCTGGTGGAAAGTTCAGAATCTTTAATTCAGTCGACGGAGATCGTTAAAAAATCACAAGAAAACGCTGGCCTTATTCTTGGTGCTATGGAAGACATGACGCTCGCCACAAATCTGTCTGAAGTCGATCAAGATTTCTCAGCTTTAAGTGTAAGAATTAGATCCGAGGCAGGTACTGAAGAAGATGTTTTGACTGTCAGCTTTGTGACTGGGAATTATACAGATCAGATTCATCTGAATCCAAGTGTGTTTGACGATACTACAGGACGAGCTTCTTTTATTCTGTACAAGAACATGCATCAGATGATGTCAAAAAAGACGGTGAAACAGGAAGAGGCCGAAATAGCGAGCAGAATTTTGTCTGTCAGCGTGCAAATAAACGGAACAAGAAGAGCGAAAATAAAGAAGAATAACTCCGTATACTTCACAGTGCGAAATGTTCTTACCAGAGACAGAACAGATGAAAAATACAGACTGTGTATGTTCTGGAACGAAGACGTCAACGCCTGGTCTGATGACGGATGTCGCACCGACAACAACAACGACAGCTACACGAGCTGTGAATGCGACCATCTGACTAGCTTCGCTGTGCTTGTCTTGTATTTTGGAAATGATACGGTTAATAATTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00211	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000203	Conserved_site	GPS motif	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001054	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR050401	Family	Cyclic nucleotide synthase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11920	GUANYLYL CYCLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001653	Molecular Function	peptide receptor activity	Interproscan
GO:0004016	Molecular Function	adenylate cyclase activity	Interproscan
GO:0004383	Molecular Function	guanylate cyclase activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006182	Biological Process	cGMP biosynthetic process	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007168	Biological Process	receptor guanylyl cyclase signaling pathway	Interproscan
GO:0009190	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf252_2.30 global RNA-seq network