| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf252_2.26 | RHOMBOID-RELATED PROTEIN | chr2 | 6448675 | 6454600 | + |
| CDS | |||||
| CsqKR_Scaf252_2.26 | |||||
| Transcript |
| CsqKR_Scaf252_2.26 |
| Protein |
| CsqKR_Scaf252_2.26 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Alpha-Helix|UBA |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00627 | UBA | UBA/TS-N domain | Domain | Interproscan |
| PF01694 | Rhomboid | Rhomboid family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009060 | Homologous_superfamily | UBA-like superfamily | Interproscan |
| IPR015940 | Domain | Ubiquitin-associated domain | Interproscan |
| IPR022764 | Domain | Peptidase S54, rhomboid domain | Interproscan |
| IPR035952 | Homologous_superfamily | Rhomboid-like superfamily | Interproscan |
| IPR041928 | Domain | UBAC2, UBA domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43066 | RHOMBOID-RELATED PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004252 | Molecular Function | serine-type endopeptidase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf252_2.26 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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