Gene detail

Detailed information of CsqKR_Scaf247_16.58 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf247_16.58	OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED	chr15	11474940	11486823	+

Gene Structure

More details in Jbrowse Sequence

CDS

CsqKR_Scaf247_16.58

ATGACTATGATATGTCTTCAGATCAGAGTACACTATGTGGATTATGGAAATACAGAAGAAACTGATCTAAATGCCCTTGTTGAGATGCCTGCTACACTTTCCAGTGTGAAACCATTTGCAAAAAAATTTGTACTTAACAATATCAGACCTACCAAAGGTCTTCATGACAGAACGACCATTAATTTTTTGCAAACAATTACTGATGGAAAGTACCTGACATGCATCACCAAATATCCACTGAAGGACAAAACTGGATTCTATGCAGAACTGTATGATGATTCAGAAAGCATTAGTGATAAACTTATTTCTGAAGGCCTGGCAACAGTGCGTCTGTCTAACATCAAACCAATTCCAGATGTAGGAGCTGGTGATGCCTCCCGTTATGGTATGGGAATTGCCAGAGATTTCACTGCATTTGGAGGAAGTTCTAGGAAAGAGTCAGAACCAATAAGGCAGGTTTATGATGACAGTTCTAACCTGATTGTTAAAGTGAAAAGCAACAAAATTCCAAATATGGTAAATGGTGGAAATTTAGATGTGAAACACAAGCGGCAGCTGGATCGAATAACAGCAGAGAGAGAACAGCTTTCAGCTGAATTAGCTAACATAAAAGACAGAATGAATACTTTACAGAATGAATACACTAACATGTCTGCCAGAGCTAACAAAGCCACATTGGCAGACCACATCAGTTCAGCTCTAGTCCTTGCTGCAAAAGTCAAACATCTCAGAAAACAGTTTCCTGTGGACAGATCAGCTCTTGATGAAGGAATTGATCTGTGTAACAGCAGTGACAGAATTAGTAATGCCTCTGTGAAGTCTTTGGCTGCTGTAGGGTCTGCTGTTTCGGTATACCGTGCTGCAATGAAAGAGATCTGCATGTGTAAAAACATTGAAGAGCTACAAGAAATGGTTGAAGCGAGAGATGCTGCAAGAAAAGACTTGTATGAACAAATAAACACTTGTATTGAGGAAGTTGAAAATGTGCCTCTGCAAGAGAGAATTCAGACTGTGCAGAAAACTGTTGTTCTTCTGAAGAAAGATTTTATCCCGTTTTTCCAGTTTGTTGTTCATGAAATCCCACTGTTAGAAAATATGATACCATCCTATCAACAGTGGAGGGAAACCAAGATTGCACAATTTTCTGAGGCTAGGGAATGTACAAACAAGAGTCGAGATGAAGTTTTACTTGCCTTTAATAATATACAGAATCAATTGTCTCTGACAGATGATGACAGCCGAGGACAGTTTGATCTGGAGGCCTTGTTAGGTAACTACATAAAGGCACTGCAGAATGAAATATCATTAACAGACATGGAACATGGTCATGATTCAGGTTTTTTGGCATCCATGGTCCAAGCTTTAGAAAAAGACCTGCAATCAGAAATATCAAATATAGAAAGTTTACAGAAACTTACAATAGATTTCATGCAACTGAAATCAGAAATTGAACCATGGCTTCAGACCTATCCAAATGTTAGTGAATTGCAGGATATTCGTAAGACACTGCGAGGCTTGAGATCAAAATTGAGGCATCGACTAGCTGATAAAGAGGATGTTGAAGAGAATGAATCTGATGGGTCTGCCCTGGCAGAAATTGTAGAGGATATAGCCAGAATACGTGATGAAATCCATCAGGCACTGACTAAAGAAGATAACATGCTGTGCAATTTATCCAAGTTAGCAGATCAGCACTTCCCAGAACTGCTTACCAGACATCCTGATCTTGGGATGGATGTTTACCTGACATACTCTGGACTGGTGAAAGCTAACTATGAATTAGACCACTTTGAAATGACTCCAGTCTCTTGTGATCTGTTCAAATCATTGTTTGCAGGAGAATCAGTTTTTATTAGGGAATACTTGCTGTCAGATGCGGATCATGTTGATAAAGGTGAATTTCTGAGTCAGGTTGTGAACTATTCAAAATTATCTCAACAAAACTTAACCACAGTAAAAGCCATCTTCTTTGACAAGGCTGCTAGACATGCATATGTGATGTTTCCTAAAACAGGAGAAATGCTTTCTACCTTTGTAGAGAATGGACAGAAACCATCCGAAAAGACTGCTCAAGAAATTTGTTTCAATGTAGCTCCTGCATTGTTAAAGCTACACAGAGAGAATATTATTCATGGTGAAGTGACACCACAAAATATTGTCATCGCAGAAGACAACAGCTGTATATTGCTAATGCCTGATTTCTCTCGAAAAACAATTGATAGATGCAGGAAAAAGTATGTTTCTAAATCTGGTCTGCAGTTTGTTGCACCTGAAATACGAAATGCTACAGAGACCAGCATGATATCACCAGTTGTTGATATGTACAGCATTGGTGTACTGTTGTTGTGGCTTCACTGCCCAGAGTCTAAGTTTGGTATGTTACCTGAGGGAACATTGGATTACACATCTGCTCCACTGAACCAATTATTAAAAGATGTTTTATCATCTTTACTGTTACCAACTCCTAACGGAAGGGCCAGCATTGAAGATCTACTTACTTCTGAGTATCTGAATACAGACATTATTGATGAACCTGTGGCAGCAGAATCTGAAAGTGTCTCGGACAGTACTGCTTCTGATGGAATTCCTTCAGAAAAGCTTTCAGATGAAATAGAAGTTTTGAATGTTGTTGACACAGCAACAGCAGACAAAACTGAGACCCAGCCAGAAGAATATGCTAGTGATGAAATAGAAGAAGAGGATAAAACCACAGAATTATCAAAACCAGACTTGTTAAATCCAGAAGAGTCCTCAGAAAATGTTGATGAAGTTACTCCAGATATAACAGAATCTGAAAAGACAGTATCTGACAAAGTAGAAGAAGAAGAGGAACCTTCAGTTTTTGCTGTGGATAGCACAAAAATTGATCTAACCAAGATTGATCTCAGCAAAACATACCTGAATTCTTCTAGACCCATTGTGACTGATCAAAAGACAAGTGATTCGCTAGAGGAAGTGGCAGTTGAAGCAGACAAAGGTTGTGATGATCAGAATTCTGATGAATCAGAGGACATAAACAATGACTCTCCAGACTTGATTACAGAATGTATTGACAGGAGAATGTCATCAAGGAACCAAGGTGGACAGAGTGCAGCTACTGACGAAGCTACTAACAATTTGGATAATCAGCATTCCTTCCAGGAGAACAATAGTGATTCACCAGTCACTGTCTCCAACAGTGTGTCTGAAGATAGTTCTGATGTTTTGTAA

Transcript

CsqKR_Scaf247_16.58

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00567	TUDOR	Tudor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR002999	Domain	Tudor domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44167	OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0044773	Biological Process	mitotic DNA damage checkpoint signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf247_16.58 global RNA-seq network