Gene detail

Detailed information of CsqKR_Scaf246_3.18 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf246_3.18	N-ACETYLGLUTAMATE SYNTHASE	chr4	6511574	6520317	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf246_3.18

TTCGACTTTCAGCAACTCAAAGCGCAGACTGTTCACGACAGCACAGTTTTAGCGAGTTTGCTGGAAGCTAACAGAGTTCTCGCTCGACCTCTCTTCATAGGCACCAATGTTCTGAGAGCAGAGAAGTTGCCAGGAGACACTTACTGTGGTGAACTTGCTGATGTGAACACAGAACTGATTATGTGGTGTCTTCTGTCTAAACATATTCCAATAATAGCAGCGTTTGGAGAGACACCTAGTGGTCAGATTCTGGCAGTGGACATGTGGTCGGTCACTGAAAAGTTGTCTTCAGCTCTGCAGCCTCTGAAAGTCATAAAAGTGAACACTTGTGGAGGATTTGTTGATGAAACTGGTTCTGTTATTGCTAACATCAATTTACCAGCTGATCTGGAAGCAGCTGCAGAGAAACCATGGTGTACTGCAGTGATAAGAGACAAGATGGAGAGAATTTACAGTCTGCTCTCTGTTTTGCCATCTGAAAGTTCTGTTGTCATCACATCAGTTGACAAAATGTTGAAAGAGCTCTTCACTCACAGAGGATCTGGGACGTTTTTCAAGATAACGGAACCCATCTTCCACTACTCCTCATTTCACAGCGTTGATATGTGTCGCCTGACAGACCTGATAAACAAAGCATTTGGCAAGATTCTGGATGATGATTACTTCATGGCTATTGAAAGTCAGCTGCATACAGTTTACCTTTCCAAAGAGTACAATGCTGCAGCCATTATACTTCAGGATGAAAATCTGGGTGTTCCGTATTTATGCAAATTTGCTGTCTCTTTGAAAGCTCAGGGGGAGGGAACTGGAGAGATGCTGTGGGAAACCATTAGAAAAGATTTTCCTCGACTCTTTTGGCGCTCAAGAGGAGACAACCCTGTAAATTCCTGGTATTTCAAAAAGTGTGAAGGAAGCTGGAGTCAACAGTACTGGACAGTATTCTGGTACGGGATTCATGAACACAAACTTACGTCAGTTCTTGTGGACTGGGCTGTGAAAAAGAAAGAGTCTTTTACTGTCCCAGAGCAAACTGCAGCCTCGTCAACTCAGCAGTGAGTGCAAACCCTCCCCCTCCCCCTCCAAAACATAACAAACAATAAGTCTCAGGTCAAAAAAAAACCAGGCTTTAAAATTATAGTGCTACAATTTAAAAATAATAATAATAATATTTATTTTATAGACTGAATTATTAGACAAAATATTTTAGTTTATGTAAAAATATCAAATTCAAATGTGATAAAAAAAAAAAAAAAAAAAAAAAGTAACTTAGTAAAAAAAATTGTCCAGACAATCCAGGTGTTTCTGTTTAACATGGTTTTTACAAAGTTTACAAAATGTGGTCACTATGTAAAGGTGCTTATGAAAATTTTAGGTGTTTTTGTACGTTTGTACATCTGGAATTAGTTTGAAAAGTGTGAAATACGGTCAATGCTTTTGTACTGTTAAGAGGTGAACAGTATAAAGTGTTAAAATGATTCTTTTAAAAAGTGGCCAGTATGTTTGGTATATATACAGGTGTCCATACAATTCAGGATTGCTTTTACAATACGACGAATAATTCTTTTTCCCAAATATGGCGTTATGTACATTATACAAAGGTGTACACTGTGTGCAGGTGTATGGAATAATGAAGTGTATGTTGTATAGAAAAGTTTTTGTTACAGTTTATTTAGGTACTAAGTCAAGTATGTATATGTTTTGTGTTAAACAAATTATGCAGCTATGGTTGCATGATATTTGAGATAAAGCCAATATTAATTCTTAAATAAAATAATAAATTATTATTTTTTATTAAAAATGTGTCTTTATTATAAAAATTAAATAATTGTGTTTAATGTAAGTTCATTAAAAAAAAAATGAAGATTAAATATCTAGTAGAAAAATAAGTAATATAAAGGGTGAATCTATAAAAGGGAAATAGATTATTTTAATACTGGCTATCTCAAAGGTGAATTAATTATATCTAAAGGATGGATATCTTAAACTAATATATTTACCCTTTAATTATATTTAGGGTAAACATTTTTTAGATGTATACATATATCAATAAAATAAATTACGTTAATGTTAGATATCTCTAAAGTGAATTAATTATATTTAACGGTAAATTTCAGTGAATGGTTATATTTACCCTTAAAAAATATTATGGGTATCAAATATATTTAGGGACATAAATAAAGTTAAGGGTAACAGGGTAATTCATGATATTAAGGGTATGTACCAAAAGGAAATAAATAATATTTTTATAGGGAAATTAAATATATTGAGGGTAAATATATTAAAGTGAATGTGTTTATGGTGTATAGTAAAATGAATTATATTAAGATATACCACTTAGTAAAATTAGTTATATGTAGAGCATATCTCAGTGAAATCAGTTATATTAAGGTTAGTTATTTTAAATTGAAATACAGAATATCAAGACTGGAAATAAATAATTTTAGGAATAGCAAGTAAATAAATGTATGTTGAAACATTCAGTAGAATTTTAAATTTTTATTAATTTTGTTTTATTTTTGTATTGACATATCTGTTTATCTATTTAATTTGTTTTCATTTTTTTTTTTTTTTCAACAAACCTTTGTAAAACCCCATTTTTTTTTTTTTTTTATAAATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04768	NAT	NAT, N-acetyltransferase, of N-acetylglutamate synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006855	Domain	Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain	Interproscan
IPR011242	Family	Acetylglutamate kinase ArgB, GNAT domain-containing	Interproscan
IPR036393	Homologous_superfamily	Acetylglutamate kinase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23342	N-ACETYLGLUTAMATE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003991	Molecular Function	acetylglutamate kinase activity	Interproscan
GO:0004042	Molecular Function	L-glutamate N-acetyltransferase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0006526	Biological Process	L-arginine biosynthetic process	Interproscan
GO:0006536	Biological Process	glutamate metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf246_3.18 global RNA-seq network