Gene detail

Detailed information of CsqKR_Scaf192_7.26 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf192_7.26	UNCHARACTERIZED	chr10	8740012	8743790	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf192_7.26

TTAATTACATAATTTTGTTGAGTAAATTTCCTTATTTTTAAACTAAGTTTTTATATTAATAAATACATATATTTTTTTACTTTTATAATTATTATAGGAGATGCTTCAGAAATTAGAAAAATTGAAATCAGATGTTCAGGAACTTCAGAGAGATTTAACCTTACGACGTTGTTTAGCTCGGAAGTCAGCCATTCCTGATCTTAAAGATTCAATTTCTACAATGGAACGACAGCTGGAAATACATCAAGACACTATTGAGCAAAAACAACCAGCATTAGAAAAGAATTGGGAAGAAGCAGTGCAGAGAATGGCAAATGAACAGGAACTTTATCAAGCCCAAGTTCATGATGTACACCGCTTACAACAGGAAACACAGCATCTAAAACTGATAGCATCACAGTTATCTTCCTTTGTTGATACTATTTCTTCTGTTACTGAGAGACTGGCACCCAAACTTGGTCAATTAACAAGTAACTCAGAACATGACAGTCAAATGCAGTCTCTGATAGAGGAGATTAATGCTGTACAACCTGATTCTCAACAAAGGGTTGATGCAATCCAGACAGTTGAAGGAGTCCGTGAAGAAAAATCTGCTAATCGTAAAAATCCACTGGATGAAGAATTAATAAAAACAAAGGGAATGTTAAAGGCTACCCCACAGCGCAAAGACAGCGGTCTGGCTTTGAAACTTGACAGTTGTTGTGACTCTCTAGTCAAATCAGATTTAGAATTAAACAATAAAATTGAAAATCTGCCCAAGAAAAATGATTCTTCTGTTTGTTCTGTTAAAGATAATGGGCATTGTTTAACAGGAGATAACTCAGTAATATCTGTTGAGACTGAGGTTAGACGAGTTACCCATCATTCTTCTTCCATGTTGAGTAAAGGTGTTATCAGACAAGAAAAGTCATCTTTACCAGTGCTGTTAGATTCTGAAAACTCTGCTTCTAAGCAGAATTGTAGTTCATCAAAACTTTTACCAAAAACAAAAACTGTAGAAGTTTTCTCCAAAGATGAAGAGGATACACTTGTGCCAAAGAGTGGACAGAAATCAAAGCAGCAAAATGTCTGTCTACAAATTAACAAAAAAGACAAAACTGTAGGTTTTTCTAGGAGAGATAAAGATGAAAGTCTGTTGAATAATGGAGAGGTTTGTGAAGAAAAAGATTTGTCTACACAGGTAAAGAGAGGTTCTGTGATTCTGAAGAAGGAAAATGTGACAAATGAAAACAGCACAGATTTAAATGACTGCAGTGTTGAGGCCACTGTGGTTCTGAGTGTTTAATTTTAAAAAAAAATTAAGTAATGATATATGTATTTGTCGGTGTTTATACAGAGATGATTTGACTGAATCAATAACCCCTAAACTCCAAAGATACTAATATGAGAATCATGACTGTTAAGATACTTAAAGAATATTAAATAACCCTAATTTTGTTTTGAGATGGAAATTTATGTTAGATACTCACTCTGTTTTTCTTCTTCACCATTATTATTGGAAATGTCAGTCTCAGGATTTTCATTCTTATTGCTCATATGTTCATGGTTAGAAGCTAAATTATCTAATTTACATTTCTCTGGGAAACTTACAGTGCATTAAGTTACTTGATGCCAGTAATCAAAATCTTTGTTGTAAGAAGTAATGAATATTTTAGAAAATGTATATTTATGTATTTAAGCATGTTCCTGCCAACAAAAATAATAAAAATTTACAATGTTAAATAAAATTTAAGGTCCATTGTTTCAGAAATGTCAAATATGGGAATGAACGATAATTGTAATAGTACAGAGATTATATATTATTTGATTCATTATGGCTAGTGTATGTATTTGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAGTGAATGAGTGAGTGTGTGTGTGTGTTGTGTGTGCATGCAAGTATGTAGATTTTATTGTTGTTTATATATGTATATATATAAACTTGTTAATAATACTTTTTGTAATCTTTTTTAAATAAAACAATCCAGTTGAATAAAGAAATGCAGGCCATTTCCTATTTATATTTGTAAAATAAAATAGTATTTTTAAAACTGTTAGAAAGCTTTTGTTTGTCACTATTTTATATACATAATTTTGAATTTAAACTGCTGAGTTTCACTGGTTTTTATTTAAGTTTATATATTAACTTTTATATAAAACAAAATGAAGTTAAATACAAAGTAGAAAAAAGAAAAACAATTACCATTAGTTTGAATGTCCATCAGTTTTAGAAAAAAGTTTAATTAAATGTATTTTATAAATGCAGTATGGAATCCTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03915	AIP3	Actin interacting protein 3	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006050	Domain	DNA photolyase, N-terminal	Interproscan
IPR022782	Domain	Actin interacting protein 3-like, C-terminal	Interproscan
IPR039320	Family	RING finger protein 207	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22635	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0030544	Molecular Function	Hsp70 protein binding	Interproscan
GO:0044325	Molecular Function	transmembrane transporter binding	Interproscan
GO:0048471	Cellular Component	perinuclear region of cytoplasm	Interproscan
GO:1901018	Biological Process	positive regulation of potassium ion transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf192_7.26 global RNA-seq network