| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf191_8.15 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | chr2 | 2572804 | 2583519 | + |
| CDS | |||||
| CsqKR_Scaf191_8.15 | |||||
| Transcript |
| CsqKR_Scaf191_8.15 |
| Protein |
| CsqKR_Scaf191_8.15 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02225 | PA | PA domain | Family | Interproscan |
| PF13639 | zf-RING_2 | Ring finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR003137 | Domain | PA domain | Interproscan |
| IPR011016 | Domain | Zinc finger, RING-CH-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR046450 | Homologous_superfamily | PA domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46539 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf191_8.15 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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