Gene detail

Detailed information of CsqKR_Scaf18_7.25 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf18_7.25	DYNEIN REGULATORY COMPLEX PROTEIN 9	chr2	11658946	11665215	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf18_7.25

GCAGATGTTTGCTCATTTCTTCAATAAAATTATTCAAATTTGTATGTTTTAGCCCTTGTAAATTATAAATATATAATAAAAGGAATATTTATTTTGCCGTGAAAAATAATTACCCCCCCCAAGAATAAATAAAATAAGTGTGTAGATCACACACCAAAGTACTTTAAGTAGCACCTTCAAGTTTTACTTGCCCTATGTATATTAATATACTGTAACATGTAAACGCCTGAAAATGTCAAATCCACATTTTTATTTTAAATGCATTAAAAATATTTTGTGCCTCGTTTGTGTCAAAGAAAATAATAATTTGTGTGTATCACAATTTAAATTGGTCGGTCAACGGTTTTTCTTTTTTTCAATTAATGATTTTCAGTTGTTTTTTTAAATTATTATGATTTATTTATATATTTTTCTTTATTTTATTTCGCTTTTACAGATTTCTCTTCAGTGACTAGAATTTTTTTCTTTATTATTTACTAATCACTACTTAAACAGATCAGAAATCAGTGATAAATTCAAATGTTTTATGTTTACATGATATCGTTGTTGAATCCCTTAAATATTTAGTAATCGGTAAATGTAGCAAAATAATATCAACCTCAATATCAAAACTCATTTCTTACGAATAATACCAAATATTTATTTTTCATTATTTCATAAAGGAGTGTGTGAGTGAAAAGAAACGAATAAAGACAGTGAAACTAACTAAACATACCCAAGACACAGTTCAGCTGAAAAGGAAAAGGAAGTGGCGTACCGGAAGCAGTATCAACATTCTGCGCTTGTGGCAACCAAACCAAACAAATCTTTTAGATATACGGCAAAAGATGGCGGACGACAGTCCCATGTTGTCCGGTGTTGACGCTATCCATGTCGCCACTGTACTGGAGGACTGTGTTGACCAGCTGTCCATACTTGGCAGAATAATGCCACCATCTTACCAGATGAGACACGATGTATCTGAGATTGTACATAATGAAATTAACAGTCTGATTGAAAGTCAGCGGGAGTTAGAAGGAAAATATCAGAGTGTACTTGTGAAGAAACTTAATCTGAAACACACCACAAGAAATGAAACAAAACTATTGGAGATAGAACAAGAAGTTTTAGAGTCTGGACGTGACTTGAAAAACACTACTCATGTTTTTGGTCGAAGTTTAAGACAAAATCCTCTCACTGGAGACAATATTACCAAGATTCAAGATGACAGATTGTTTGTTGAGCGGGTTATGGTTGACACAATGGGGGAACTTATTGAGAACTGCACTTTTCAGGCTTTGATTGATGCTGTCAATGCAGAGAAAAAAAGAAAGGCAACTTTACAAGAAACCATTCAGAAAGAAGAAGATGGTAGAAAAAGAGTTCGTCAGCTACAGAAACAACTTCAGGACATTAAGAAGGAGAAGGAGCAAGAAATTCGTGAAAGAAATGAGAGGATTGCTCATCTCAAGGATCAGCTGCAGGAGACAAAAGCCAAAACAAACATGGAGGGAAAATACATAAAGAAATCTGCTGAAGTGACAGTAGCTCAAACACAGAAAAGATGCTCTTTGGCTGAGAAGGAGATGAAGGATGAAATAATGAAACTACAAAATCAGATTGATGCTGAGGAGAGAGCAAACAACGAGATTGAATCATACCTGCGAGCACATCATGCAGATTTGTCTAAGAAAATTGAAGACTGGATAGAAAAGTATGACAAGGATGTGGAGGCAAAGCAGAGGGAACTGGATGTATTGAAGGCATCAAAGGCAAAGGATCTGGAAAGACTGCAAGAGCTGACTAAACTGTACAAGGAGTACGAGCAGGTTGTTGTAGAAGACAGGATTGCTAAAGAGAAGGAGCGCAGACGAGCAGAACAAGACACAATAGAACTGAAGGGTGCAATTAAGTTACAAGCCTGGTGGCGAGGAACAATGGTTCGCAAAGGATTTGGTCCTTACAGTAAGAAGAAGAAGAAAGGTAAAAAAGGAAAGAAAGGGAAAAAGGGAAAGAAGTGATCTAATGACTTTCATTCCACTTTTGTCATTATTTTATATGACCCTTGTACCTGTGATATCTTACAACTGTGTATGCTGAATAAATACTTTAAAAAAATTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00612	IQ	IQ calmodulin-binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000048	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR042618	Family	Dynein regulatory complex protein 9	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14871	DYNEIN REGULATORY COMPLEX PROTEIN 9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0031514	Cellular Component	motile cilium	Interproscan
GO:0044782	Biological Process	cilium organization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf18_7.25 global RNA-seq network