Detailed information of CsqKR_Scaf175_9.14 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf175_9.14PHD/F-BOX CONTAINING PROTEINchr72963411329646103+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF16866PHD_4PHD-fingerDomainInterproscan
PF17811JHDJumonji helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR003347DomainJmjC domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR041070DomainJumonji, helical domainInterproscan
IPR050690FamilyJHDM1 Histone DemethylaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23123PHD/F-BOX CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006482Biological Processprotein demethylationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf175_9.14 global RNA-seq network
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