Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
CsqKR_Scaf174_40.8 | LD44813P | chr1 | 35740984 | 35753214 | + |
CDS | |||||
CsqKR_Scaf174_40.8 | |||||
Transcript |
CsqKR_Scaf174_40.8 |
Protein |
CsqKR_Scaf174_40.8 |
Gene family | Subfamily |
---|---|
Ubiquitin Family | E3|E3 activity RING|RING |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
PF05773 | RWD | RWD domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
IPR006575 | Domain | RWD domain | Interproscan |
IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
IPR016135 | Homologous_superfamily | Ubiquitin-conjugating enzyme/RWD-like | Interproscan |
IPR018957 | Domain | Zinc finger, C3HC4 RING-type | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR40237 | LD44813P | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0005515 | Molecular Function | protein binding | Interproscan |
GO:0046872 | Molecular Function | metal ion binding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for CsqKR_Scaf174_40.8 global RNA-seq network |